| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0295 |
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| Symbol | |
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| ID | 4433232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 274267 |
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| End bp | 275388 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639666091 |
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| Product | endo-1,4-beta-xylanase D |
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| Protein accession | YP_808327 |
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| Protein GI | 116511111 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0385637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA AAAGAAGTGC AAGATCAAAG AGTTCAAAAA AGGCCTTTTG GAAACTGACG
TTGATTATGG GAGCCCTGCT GATTGTTGTC GCTGGAATCG GGACATATTA TTACGATCAA
GGAGTTCGTA AGCAGAATAT TGCTTATGAA AAGCAGGTAA ATGAAGCAAA AGAAGCCAAA
GATAAAGCCT ATAATTCCAG AAAAACAAGC GACATTAATG AAGCAAAAAA ACTAATTGTT
AAGCTCCATG AGAAAGATAA AAGTAGTCTA AATCAATCAA TTACTCAACT TTTGGCATAT
TTGACAGATA TTGATAAAGT GAGTCAACTG GTTGCTAAAG AGCATCAAAA TATCACCGAA
GATACGATAA AAGAAGCAGA GCAAGCTCTT GAACTTTTAA ATGCTTCTTA TGAAAAAACA
GATAAAGAAA AATTTGCTCA ACAAATCGCT ATTGATAAGC AAGTTCTTGT TGAACGACAA
AAAGAGGCTG AACGAATTGC TGATGAAAAA AATAAATTAG CAAATCAAAA ATTGATTGCT
TTGACTTTTG ATGATGGTCC AAACCCGACT ACCACTCCTC AGTTACTAAA AACATTGAGT
GCTGCAAAAG TTCCCGCTAC CTTTTTTGCT TTGGGTAAAG AGGCTCAGCA GTATCCCGAT
ATTATTAAAG AGGAATCTGA CTTAGGAAAT GAAGTCGCTT CACATACTTG GGATCATAAA
GATTTGGTGA CTTTGTCACC GGCTCAACAA AAACAAGAAA TTGAAAGTGC CAATCAATTA
ATCAATAAGA TTACAGGGAA AAATGTCACG CTCTTTAGAC CTCGGTACGG AAGTTACAAT
AATTCTGTAT TGTGCCAAAC TGATTTAACA GCAGTCAACT GGTCAGTGGA TACTAATGAC
TGGCGTTACC ATACAAGCGC ACCGGTCGTT CAAAATGTAG CGACTTATGC TCATGATGGT
GCGATTATTT TGATGCATGA TATTCATCAG TGGTCAGTAG ATGCCGTACC ACAAATTATT
CAAAATTTGA AAGCACAAGG ATATACTTTT GTGACTGTCA GTACTTTATT GGATATTCGA
AATGGGGGCG CAAAAGCACA ACAAGTGTAT TTTGGCAGAT AA
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| Protein sequence | MSQKRSARSK SSKKAFWKLT LIMGALLIVV AGIGTYYYDQ GVRKQNIAYE KQVNEAKEAK
DKAYNSRKTS DINEAKKLIV KLHEKDKSSL NQSITQLLAY LTDIDKVSQL VAKEHQNITE
DTIKEAEQAL ELLNASYEKT DKEKFAQQIA IDKQVLVERQ KEAERIADEK NKLANQKLIA
LTFDDGPNPT TTPQLLKTLS AAKVPATFFA LGKEAQQYPD IIKEESDLGN EVASHTWDHK
DLVTLSPAQQ KQEIESANQL INKITGKNVT LFRPRYGSYN NSVLCQTDLT AVNWSVDTND
WRYHTSAPVV QNVATYAHDG AIILMHDIHQ WSVDAVPQII QNLKAQGYTF VTVSTLLDIR
NGGAKAQQVY FGR
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