Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0115 |
Symbol | |
ID | 4432515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 105797 |
End bp | 106642 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639665921 |
Product | transposase |
Protein accession | YP_808161 |
Protein GI | 116510945 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00142442 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGCTG CGGATATGGC TCAAACCATA CAAACTTTAG CACTCAATGT CAGACTAAGC TGTCAACTCC TTGATGTTCC TGAATCAAGT TATTATGAAC GGATTAACCG ACATCCATCT AAAACTCAAT TAAGGAGACA ATACCTGTCA CTCAAAATTT CTCAACTCTT CAATGCTAAC CGAGGAATCT ATGGTGCTCC TAAAATTCAT CATCTTCTAC TTAAACAAGG GGAAAAAGTC GGGTTAAAAC TGGTACAGAA GCTAATGAAG CAACTTCAAC TCAAGTCTGT AGTCATTAAG AAATTTAAGC CTGGATACTC ACTAAGTGAT CACATCAATC GAAAAAATCT CATACAGACT GAACCTACAA AGAAGAATAA GGTTTGGTCA ACCGACATTA CTTATATTCC TACTCAACAA GGATGGGCTT ATCTCTCAAC CATTATGGAT CGTTATACTA AAAAAGTCAT TGCTTGGGAT TTGGGCAATC GAATGACTGT AGAATTAGTG CAAAGAACTT TAAATAAGGC CATTAAATCA CAAGACTATC CAGAAGCTGT TATTCTTCAT TCTGACCAAG GAAGCCAGTA TACGAGTCTA GAGTATGAAG AGTTTCTTAA GTATTATGGG ATGACTCACT CTTTCAGTCG AAGGGGATAC TCTTATCATA ATGCCAGTCT TGAATCTTGG CATGGACATT TAAAAAGAGA GTGGGTGTAT CAATTTAAAT ATAAGAACTT TGAAGAAGCC TATCAGAGTA TTTTCTGGTA CATCGAAGCC TTTTATAATT CAAAACGAAT CCATCAAAGT TTAGGGTATC TTACACCTAA TCAATTTGAA AGGTAG
|
Protein sequence | MSAADMAQTI QTLALNVRLS CQLLDVPESS YYERINRHPS KTQLRRQYLS LKISQLFNAN RGIYGAPKIH HLLLKQGEKV GLKLVQKLMK QLQLKSVVIK KFKPGYSLSD HINRKNLIQT EPTKKNKVWS TDITYIPTQQ GWAYLSTIMD RYTKKVIAWD LGNRMTVELV QRTLNKAIKS QDYPEAVILH SDQGSQYTSL EYEEFLKYYG MTHSFSRRGY SYHNASLESW HGHLKREWVY QFKYKNFEEA YQSIFWYIEA FYNSKRIHQS LGYLTPNQFE R
|
| |