Gene LACR_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0048 
Symbol 
ID4434635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp43227 
End bp44645 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content40% 
IMG OID639665857 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_808098 
Protein GI116510882 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGTTG GTGCACAAGC AACAGAAGTT GATTTGGTTA TTATTGGTTC AGGCCCTGGC 
GGTTATGTTG CGGCCATCCG TGCGGCTGAA CTTGGTAAAA AAGTTACGAT TATTGAAAAA
GATAATGTCG GTGGGGTTTG TTTAAATATT GGATGTATCC CATCAAAAGC ATTGATTAAT
ATCGGTCATC ATTATCAAGA ATCTTTGGAA GAAGAAAAGG GCGAAAATCC TTTTGGACTT
TCTGTCGGAA ATGTTAAATT AAACTGGGAA TCTGCCCAAA AATGGAAACA AGATAAAGTT
GTCAACCAGT TGACTGGTGG CGTTAAAATG CTACTTAAAA AACACAAAGT TGACGTAATT
CAAGGAACAG CTGAGTTTAT TGATAACAAT ACAATCAATG TTGAACAAGA AGATGGTTTC
CAACTTTTGC AGTTCAACGA TGTAATTATC TCAACTGGTT CACGTCCTAT TGAAATCCCA
TCTTTCCCAT TTGGTGGTCG TATTATTGAC TCAACAGGTG CTTTGTCACT TCCAGAAGTG
CCTAAACATT TGATTATTGT TGGGGGTGGC GTTATTGGTT CTGAGCTTGG TGGAGCTTAC
CGCATGCTCG GTTCTAAGAT TACAATTGTT GAAGGCTTGG ACCACATTTT AAACGGTTTT
GATAAAGAAA TGTCTGATAT CATTGCGAAT CGTGTGAAAT CTGCTGGTTC TGAAATCTTT
ACTTCGGCGA TGGCTAAATC AGCTACTCAA ACCGATAAAG ATGTGACTTT AACTTTTGAA
GTTGACGGAA AAGAACAAAC AGTAACTGGT GATTACTTAC TCGTTTCTGT TGGACGTCGT
CCAAATACTG ATTTGATTGG CTTGAACAAT ACTGATGTCA AATTGACTGA CCGTGGTTTG
ATTGAAGTTG ATGATTCTTA TGCAACGAAT GTTCCTCATA TTTACGCGAT TGGTGATGTG
GTTCCTGGAC CAATGCTCGC ACACAAAGCT TCTTTCCAAG CCAAAGTTGC TGCAGCGGCC
ATTGCTGGAG CTGAAGATGA CGTGGACTTG CACGTTGCTT TACCAGCCGT TGCTTATACA
ACAACTGAAC TAGCAACAGT TGGAGAAACA CCTGAATCTG TTAAAGACCG TAAAGATGTC
AAGATTTCTA AGTTCCCATT TGCTGCAAAT GGTCGGGCCA TTTCAATGAA TGATACCACT
GGTTTCTTAC GTTTGATTAC CGAAACTAAA GAAGGTGCCT TAATTGGTGC TCAAATCGTT
GGTCCTGGTG CATCTGACTT GATCTCTGGT TTATCACTAG CGATTGAAAA TGGATTGACT
TCTAAAGACA TTTCATTGAC TATCCAACCT CACCCAACAC TTGGTGAAGC GATTATGGAT
ACAGCTGAAT TGGCTGATGG CTTACCAATT CACGTTTAA
 
Protein sequence
MVVGAQATEV DLVIIGSGPG GYVAAIRAAE LGKKVTIIEK DNVGGVCLNI GCIPSKALIN 
IGHHYQESLE EEKGENPFGL SVGNVKLNWE SAQKWKQDKV VNQLTGGVKM LLKKHKVDVI
QGTAEFIDNN TINVEQEDGF QLLQFNDVII STGSRPIEIP SFPFGGRIID STGALSLPEV
PKHLIIVGGG VIGSELGGAY RMLGSKITIV EGLDHILNGF DKEMSDIIAN RVKSAGSEIF
TSAMAKSATQ TDKDVTLTFE VDGKEQTVTG DYLLVSVGRR PNTDLIGLNN TDVKLTDRGL
IEVDDSYATN VPHIYAIGDV VPGPMLAHKA SFQAKVAAAA IAGAEDDVDL HVALPAVAYT
TTELATVGET PESVKDRKDV KISKFPFAAN GRAISMNDTT GFLRLITETK EGALIGAQIV
GPGASDLISG LSLAIENGLT SKDISLTIQP HPTLGEAIMD TAELADGLPI HV