Gene Ksed_24260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24260 
Symbol 
ID8373929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2508548 
End bp2508781 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content69% 
IMG OID644992652 
Productpredicted DNA-binding protein with an HTH domain 
Protein accessionYP_003150156 
Protein GI256826196 
COG category[R] General function prediction only 
COG ID[COG4710] Predicted DNA-binding protein with an HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.322947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG CCACCTCCGT GAAGCTGTCC GACGAGACCG GCCGCAAGCT CGAGCAGCTG 
GCCGCCGCCA CCGGGCGCTC GAAGTCCTAC TACCTCCGCG AGGCCGTGGA GACCCACATC
GACCGCCTCC TCTACGAGTA CGGCATCGTC CAGCGGGTCG AGGATGTCCG CGCCGGCCGC
GAGGCCACCT ACGGTCTCGA CGAGGTGGAG GCGGATCTTG GCCTGGACCG TTGA
 
Protein sequence
MTVATSVKLS DETGRKLEQL AAATGRSKSY YLREAVETHI DRLLYEYGIV QRVEDVRAGR 
EATYGLDEVE ADLGLDR