| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_23350 |
|---|
| Symbol | |
|---|
| ID | 8373838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2423863 |
|---|
| End bp | 2425488 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644992569 |
|---|
| Product | dolichyl-phosphate-mannose--protein O-mannosyl transferase |
|---|
| Protein accession | YP_003150075 |
|---|
| Protein GI | 256826115 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCCT CCTCCGGTGC CGCCGTGCCG GCTGCCCCGG ACCTCGAGCA GCAGCTGAAC
GAGGACCTGC TCGGCCCCCT CGCACGACGC GGGGCGATCG CGCGCCGCAT CCGCATGTGG
GCCTGGATCG GCCCCCTGCT GTGCATGGTG CTCGGCGGCG GGTTGCGGGT GTGGGACCTG
CACGAGCCCC ACCAGCTGGT CTTCGACGAG ACCTACTACG TCAAGCAAGC GTGGTCGCTG
GCCGAGTGGG GCTACGAGCG CGACAAGCCC GACGGCATGG AGGAGCCCGA CGAGCACTTC
ACCACCGGCA ACTGGGAGAC GGTCTACGTC GACGAGGCCG ACTTCGTGGT GCACCCCCCG
GTCGGCAAGT GGGTGATCGC CGCCGGCGAG GTGGCCTTCG GCATCGAGTC CTCCTTCGGG
TGGCGCGTGG GCGTGTGGGT GCTGGGCACG CTGTCCATCC TGATCATCGG GCGCGTGGCC
TGGGAGCTGT TCGGCTCGGC CACGCTGGCG ACGCTCGCCT CCTTCCTGGC GATGCTGGAG
GGGCACCACT TCGTCCACAG CCGCACCGGG CTGCTCGACA TCGTGCTCAT GTTCTTCGTG
CTGGTGGGCT TCTGGATGCT GCTGCTGGAC CGCACCGCAT CGCGCCGCGT GCTCGCGCGC
AAGGTGGCCG CCCTGTACGA CGGCGACGCC TGGCGATGGG GGGTGCGTCG CCCCGTCGTG
GGGATGGTGC TGGGGCCCTG GCTGGGCCTG CGCCCGTGGC GGTGGGCGGC CGGCATCAGC
CTGGGGCTGG CCGCGGGGGT GAAGTGGTCC GGTCTGTACG CCCTGGCGGC CTTCGGCCTC
ATGACCGTGC TCTGGGACGT CATGGCGCGC AAGCGCGCCG GGGTGTCGCA GCCATGGGCC
GCGGGCCTGG TGCTGCGGGA CGGGCCGTTC GCGTTCGTCG CGGTCTGCGG CGCCGCCCTG
GTGGCGTACA CCGCATCGTG GGTGGGGTGG TTCCGGAGCT CCGGGGGGTA CCTGCGGCAG
TGGGCGGTGG AGAACCCCGG CGAGGGCGTG CAGTGGCTGC CGGCGCCCTT GCGCTCGCTG
TGGGAGTACC ACGTGCGGAT ATACGAGTTC CACCTCGGGC TGACCAGTGA CCACACCTAC
CGGTCGAGCC CCTGGAGCTG GCCGCTGCAG CTGCGGCCGA CCTCCTTCTT CTACGAGTCC
AAGGGGCTCG GGGAGGCCGG GTGCGAGGTG GAGAAGTGCT CCAAGGCCAT CAACTCGGTG
GGCTCGGTCT CGATCTGGTG GGCCGCGACC CTGGCCTTCT TCGTGCTGCT CTTCTGGTGG
GCCTCGCAGC GGGACTGGCG GGCCGGCGCC ATCGTGGTGG GGATCCTGTC CGGGTGGCTG
CCGTGGCTGC CGGTGCAGCA CCGCACGATC TACCAGTTCT ACTCGATCGC CTTCGAGCCG
TTCATGGTGC TGGCGGTGGT GTTCGTCATC GGGTTGGCAC TGCGGCACCG GTGGGGCATC
TGGGCCGTGG GCACCTACCT GGTGCTGGTG GTGCTGAACT TCTGGTACTT CTGGCCCGTC
TGGACCGCGC AGGTGATCCC GTACTCCGAG TGGCGCGACC GGATGTGGTT CGCCAGCTGG
ATCTGA
|
|---|
| Protein sequence | MPPSSGAAVP AAPDLEQQLN EDLLGPLARR GAIARRIRMW AWIGPLLCMV LGGGLRVWDL
HEPHQLVFDE TYYVKQAWSL AEWGYERDKP DGMEEPDEHF TTGNWETVYV DEADFVVHPP
VGKWVIAAGE VAFGIESSFG WRVGVWVLGT LSILIIGRVA WELFGSATLA TLASFLAMLE
GHHFVHSRTG LLDIVLMFFV LVGFWMLLLD RTASRRVLAR KVAALYDGDA WRWGVRRPVV
GMVLGPWLGL RPWRWAAGIS LGLAAGVKWS GLYALAAFGL MTVLWDVMAR KRAGVSQPWA
AGLVLRDGPF AFVAVCGAAL VAYTASWVGW FRSSGGYLRQ WAVENPGEGV QWLPAPLRSL
WEYHVRIYEF HLGLTSDHTY RSSPWSWPLQ LRPTSFFYES KGLGEAGCEV EKCSKAINSV
GSVSIWWAAT LAFFVLLFWW ASQRDWRAGA IVVGILSGWL PWLPVQHRTI YQFYSIAFEP
FMVLAVVFVI GLALRHRWGI WAVGTYLVLV VLNFWYFWPV WTAQVIPYSE WRDRMWFASW
I
|
|---|
| |