Gene Ksed_22140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_22140 
Symbol 
ID8373717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2291523 
End bp2293106 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content76% 
IMG OID644992456 
Productputative exporter of polyketide antibiotics 
Protein accessionYP_003149962 
Protein GI256826002 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3559] Putative exporter of polyketide antibiotics 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.357083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGGCGGGGTG GGGGCGGGTG CTCCTCCTCG GGTGGCGCTC CGGGTGGCGC 
GGGCTGGCCG CTTGGGTCGT GGGCCTCTGT GCGCTGATGG GGATGACGGC CGGCTCCATC
GCCTCGGTCT ACACCACCGA GGCCGAGCGC ACGGCCTACG CGCGCATGGC CGGGAGCCCG
GGCATGTCGG CACTGTCCGG CGACGTCGCC GGCGTCGACA CCCTCGGCGG GATCACCGCC
AACGAGTTCG GGCAGATCGC CGGCTTCGCG GTGCCGCTCA TGGCCATCGC CCTGGTCGTC
CGGGGCACTC GCACCGAGGA GCAGGCCGGC CGCCACGCCA TGCTCCGGGC CGGTCCGCTG
GGCCGTCTGG CTCCGCTGGC GGCCGCCCTG CTGACGGCGC TGGGAGCCCT CGCCGCGATG
GCCGCCGGGA GTGCCGTCCT CATGGTGGCC AACGGTGCCG ACGGGACGGG GGCGCTGTAC
TACGGGGCGG GGCTCTTCGC CCTCGGGGCC GTGCACGCGG CGGTGGCGGC CCTCGTCGCC
CAGCTCGTGG GGCAGGCCCG CGGCGTGTGG GCGGTCTCCC TCCTGGTGGT CGTGGTCGGT
TTCGTCCTCC GCGGTGTCGG TGCCGTGCGG GGCGGTCCGT GGGGCTGGGC CTCGCCGCTG
GGCTGGCTGG ACGCGCTGCG CTCCTTCGGC GACGACCCGC GGTGGTGGCC GCTGGCCCTG
AGTCTCGGCG TGTTCCTGGT GCTGACCGGG GCGGCGGTGG CGCTCGCCGC TCGCCGCGAC
CTCGAGGCCT CCCTGTGGTC GGCCCGCCCG GGTCCGGCGG GCGCTGGCGG GAGGCTGCGC
ACCCCGTGGG GCCTGGCCCT CCACGAGCAC GGCCTGACCA TCCTGGGCTG GGCGGTCGGC
ACGGCCGTGC TCATGGGCGC CTACGGGCTG CTCACCCAGC CGATGATCGA CGCGCTGCGG
GACATGCCCG AGCTGCAGGG ATACCTCCGG GCCGCCGAGG AGGTCGTGGA CACGGTCGTG
GCCACCTTCG CGATGCTGCT CGGGGCCCTC GCGGTGGCGA GCGTGCTCCA GGCCGCCGGG
GGACTGCGCA CCGCGGAGGA GCAGGGGCTG CTCTCCCAGC AGCTCGCCGG ACCGGTCTCC
CGCACCGGCT GGTGGTGGAC CCACGCGGTC GTCATCGCCC TGGGGGCGCT GCTGGTCGTC
CTCGTCGGTG GCGCCGCCCT CGCCGGCAGC ATCGTGGTGA GCACGGACGA CGCGGGCCGC
TTCGGCGAGC TGTTCGCCGC CGGGCTGGCG CAGCTGCCGG CGGTCGTGCT CTTCCTCGGT
CTGGTGACGC TGCTGCTCGG CTGGGTGCCG GAGCACCGCG GCCTGGTGTG GCTGCCCTTC
GCGGCGGCGC TCGTCATCGG CTGGCTCGGG CCGGCCCTCG ACCTGCCGCA GTGGGTCATG
GACGTCGCCC CGCTGACCGC GGTGGGGCAG GTGCCGGTCG ACGACTTCCG GCTCGGCGCG
GCCGCGGTCC TGGTCCTGCT GGGGGTGGTG CTCTCCGCCC TCGGGGCGAT CGGCCTGCGG
CGGCGGGACA TCCCGCGGGT CTGA
 
Protein sequence
MSSTAGWGRV LLLGWRSGWR GLAAWVVGLC ALMGMTAGSI ASVYTTEAER TAYARMAGSP 
GMSALSGDVA GVDTLGGITA NEFGQIAGFA VPLMAIALVV RGTRTEEQAG RHAMLRAGPL
GRLAPLAAAL LTALGALAAM AAGSAVLMVA NGADGTGALY YGAGLFALGA VHAAVAALVA
QLVGQARGVW AVSLLVVVVG FVLRGVGAVR GGPWGWASPL GWLDALRSFG DDPRWWPLAL
SLGVFLVLTG AAVALAARRD LEASLWSARP GPAGAGGRLR TPWGLALHEH GLTILGWAVG
TAVLMGAYGL LTQPMIDALR DMPELQGYLR AAEEVVDTVV ATFAMLLGAL AVASVLQAAG
GLRTAEEQGL LSQQLAGPVS RTGWWWTHAV VIALGALLVV LVGGAALAGS IVVSTDDAGR
FGELFAAGLA QLPAVVLFLG LVTLLLGWVP EHRGLVWLPF AAALVIGWLG PALDLPQWVM
DVAPLTAVGQ VPVDDFRLGA AAVLVLLGVV LSALGAIGLR RRDIPRV