Gene Ksed_21800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21800 
Symbol 
ID8373684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2257578 
End bp2258255 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content75% 
IMG OID644992424 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_003149930 
Protein GI256825970 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0000054024 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.248361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG GGGGCGTCAC CGCATCGGGG CGGGATGCGG GGCAGGGCAC CGCGGGCGAG 
GGGGCGGCAC CGGGGTTGCC GGCGGGCTCC GAGGTGGTGG TGGGCGCCGA CGGGCTGGCG
CGCACTCCGT GGGGCGACTC CAGCGACCTG ATGCGCCACT ACTACGACAC CGAGTGGGGC
CTGCCGGTCC GGGACGAGGC CGGGCTGTTC GAGCGGCTGA CGCTGGAGGC CTTCCAGTCC
GGGCTCTCGT GGGCGACCAT CCTGCGCAAA CGGCCGGCCT TCCGGGAGGC CTTCGCCGGG
TTCGGCCCCG ATGCCGTGGC GGCCTTCGGC GAGGGGGACG TCGAGCGTCT GATGGCCGAC
GCCCGCATCG TGCGCAACCG GCGCAAGGTC GAGGCGGCGG TGACCAATGC CCGGGCCACC
GTGGCCCTGC GCGAGGGCGG CGGCCTGGCG GACTTCGTGT GGTCCTTCCG GCCCGCCGAG
ACGCCGCGGC CGCTGCGCGT GGCCGAGGTG CCCACGCAGT CCGCGGAGTC GGTGGCGCTG
TCGAAGGCGC TCAAGCAGCG CGGCTTCGCC TTCGTGGGGC CCACGACGAT GTACGCGCTG
ATGGAGGCCA TCGGGATGGT GGACACCCAC CTGGTGGGCT CGCACCGCCG CGGCACCAGC
GGGGTCTGGC CGGACTGA
 
Protein sequence
MSGGGVTASG RDAGQGTAGE GAAPGLPAGS EVVVGADGLA RTPWGDSSDL MRHYYDTEWG 
LPVRDEAGLF ERLTLEAFQS GLSWATILRK RPAFREAFAG FGPDAVAAFG EGDVERLMAD
ARIVRNRRKV EAAVTNARAT VALREGGGLA DFVWSFRPAE TPRPLRVAEV PTQSAESVAL
SKALKQRGFA FVGPTTMYAL MEAIGMVDTH LVGSHRRGTS GVWPD