Gene Ksed_21620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21620 
Symbol 
ID8373666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2241118 
End bp2241834 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID644992408 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003149914 
Protein GI256825954 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.019443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0473518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA GCGCTGACGC CACCCTCCTC GTGGTCGAGG ACGAGCCCAA CATCCGCGAG 
CTGCTGGCCA CGAGCCTGCG CTTCGCCGGG TTCGAGGTGC ACACCGCGGC GCAGGGGAGC
ACCGCCCTGC AGCTCGCGGC CGAGGTCGAG CCCGACCTGT TGGTGCTGGA CGTGATGCTG
CCGGACATGG ACGGCTTCAC CATCACCCGC CGCCTGCGCG AGCGCGACCA GCACATGCCG
GTGCTCTTCC TCACCGCCCG GGACTCGGTG GACGACAAGG TCAAGGGGCT GACCGTCGGC
GGCGACGACT ACGTCACCAA ACCGTTCAGC CTGGAGGAGG TGGTGGCCCG CATCCGCGCC
ATCCTGCGGC GCAGCCACGC CGAGGACCAG GCCGACGAGG ACCGCGTGCT GACCTTCGAG
GACCTCACCC TCAACGAGGA CACCTACGAG GTCTCCCGCG CCGGACGCGT CATCGAGGTC
TCCCCCACCG AGTTCAACCT GCTGCGCTAC CTGATGCAGA ACCCCCACCG GGTGCTCTCG
AAGGCGCAGA TCCTGGACCA CGTCTGGGAC TACGACTTCC GCGGGGAGAT GGGCATCGTC
GAGAGCTACA TCTCCTACCT GCGCCGCAAG ATCGACACCG AGGGACTGCC TCCCCTGATC
CACACCAAGC GGGGGGTGGG CTACGTCCTG CGCCTGCCGC CGGAGTCGGT CGCGTGA
 
Protein sequence
MDTSADATLL VVEDEPNIRE LLATSLRFAG FEVHTAAQGS TALQLAAEVE PDLLVLDVML 
PDMDGFTITR RLRERDQHMP VLFLTARDSV DDKVKGLTVG GDDYVTKPFS LEEVVARIRA
ILRRSHAEDQ ADEDRVLTFE DLTLNEDTYE VSRAGRVIEV SPTEFNLLRY LMQNPHRVLS
KAQILDHVWD YDFRGEMGIV ESYISYLRRK IDTEGLPPLI HTKRGVGYVL RLPPESVA