Gene Ksed_21420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21420 
Symbol 
ID8373646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2212367 
End bp2213068 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID644992389 
Product2-octaprenyl-6-methoxy-1,4-benzoquinone methylase /demethylmenaquinone methyltransferase 
Protein accessionYP_003149895 
Protein GI256825935 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0478514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000156795 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGCG CCAGCCTCGC GAAGGACCCC TCGCACGTCT CCTCGATGTT CGATGAGGTC 
GCACCCCGCT ACGACTGCAC CAACGACGTC CTGTCGATGG GGCAGGCCCG CCTCTGGCGG
CGAGCCGTCA CCCGCACCAT CGCCCCGCGT CCGGGAATGC GCATCCTGGA CCTTGGCGCC
GGCACCGGCA CCTCCAGCGA GCCGCTGGCC GATGCGGGTG CCGATGTCGT GCCTGCCGAC
TTCTCCGAGG GCATGCTCGC CGAGGGCCGA CGCCGCCGCC CGGACATGCC GTTCACCCAC
GCCGACGCGA TGGACCTGCC CTTCGAGGAC GCATCGTTCG ACGTCACCAC CATCAGCTTC
GCGCTGCGCA ACGTGGCCGA CCCGGCCCTG GCGCTGCGTG AGATGGCACG CGTCACCCGC
CCGGGCGGCC GGTTGGTGCT GTGCGAGTTC TCCAGCCCGA CCTTCGCACC CTTCCGGACG
GTGTACGACA CCTACCTGAT GAAGGCCCTG CCGGCGATCG CCAGCCGCGT GTCCTCCAAC
CCGGAGAGCT ACCACTACCT CGCCGAGTCG ATCGCGGACT GGCCGGACCG GGACGGGGTC
CGCCGCATGG TGGAGGCTGC CGGGTGGACG GGCGTGGAGG TGCGTAACCT CTCCGGTGGC
GTGGTCGCCC TGCACACGGC CCACTGCCCC GCGGGACGCT GA
 
Protein sequence
MTRASLAKDP SHVSSMFDEV APRYDCTNDV LSMGQARLWR RAVTRTIAPR PGMRILDLGA 
GTGTSSEPLA DAGADVVPAD FSEGMLAEGR RRRPDMPFTH ADAMDLPFED ASFDVTTISF
ALRNVADPAL ALREMARVTR PGGRLVLCEF SSPTFAPFRT VYDTYLMKAL PAIASRVSSN
PESYHYLAES IADWPDRDGV RRMVEAAGWT GVEVRNLSGG VVALHTAHCP AGR