Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_21330 |
Symbol | |
ID | 8373637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2200703 |
End bp | 2202136 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644992380 |
Product | sugar phosphate permease |
Protein accession | YP_003149887 |
Protein GI | 256825927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.428425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00018034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCACGT TGTCGCGCCC TGCCCTTCCC CCCTCCGGCG GGCGACCCGC GGGAGGGCTG CAGACCCCCG ACCAAAACGC CACCCAGGCA GCTGACCTGG GCCAGCGCTT GGGCGGGCTG CGCTTCAACG CCCAGCACCG CAAGCTCATC ACCGGGTCCG GGGTCGGCTG GGCCCTGGAC GCCATGGACG TGGGCCTCAT CTCGTTCGTG ATGGCCGCCC TGGCCGCGGA GTGGGGGCTG GGCAAGACCG AGCTCTCCTG GGTGGCCTCC ATCGGCTTCC TCGGCATGGC GATCGGTGCA ACCTTCGGCG GGCTGCTGGC CGACCGCTTC GGGCGCCGCA ACGTCTTCGC GGCGACCCTG CTGGTCTACG GCCTGGCCAC CGGCGCCAGC GCCCTGGCCT GGTCGCTGGG GGCGCTGCTC GCCTTCCGCT TCCTGGTGGG GCTGGGGCTG GGGGCGGAGC TCCCGGTGGC CTCGACGCTC GTCTCGGAGC TGTCCCCCAC CCGTATCCGG GGCCGCATGG TGGTCGCCCT GGAGTCCTTC TGGGCCGTGG GCTGGATCCT CGCCGCGGCC ATCGGCTACT TCGTCGTGCC GGACTTCGGG TGGCGCTGGG CCCTCGCCCT GGGTGTGGTG CCTGCCCTCT ACGCGGCCGT CATCCGATGG GGTCTGCCCG AGTCGCCGCT CTGGCTCGCC TCCCAGGGGC GTAGCGCTGA GGCCGAACGG GTCGTCCGCC GCTTCGAGGA CGCGGCGCCC ACCCACACCG CGCCCGCCGA CCCCGCCGCA CCCGACGCCC CGCCCACCCC GCGCGCCCCC GCCGATGCGG GGAGCACCCG CCGCGCGAAC CGGGTCACCG AGGGCCTGTG GTCCGGTCGG TTCGCGCGCC GCACGGTGGG CATCTGGGCC ATCTGGTTCC TGGTCAACTT CTCGTACTAC GGCGCCTTCA TCTGGCTGCC GACCCTGCTC GTGGACCGCG GCTTCGACAT CGTGCAGTCC TTCGGGTACG TCCTGATCAT GACGCTGGCC CAGCTGCCGG GCTACCTGCT GGCGGCCGTG CTCATCGAGG TCTGGGGGCG CCGCGCGACC CTGGCCACCT TCCTGGCCGG CTCCGCGGCC TCGGCGGTCC TGTTCGGCAT GGCGGACTCG CTGCCGGTGC TGTTGGCCAC CGGTGCGGCG CTGTCCTTCT TCAACCTCGG CGCCTGGGGT GCGCTCTACG CGGTCACCCC GGAGATCTAC CCCACCCGCC TGCGGGGGTC CGGTGCCGGG GCGGCGGCGG GTTTCGGCCG CATCGCCAGC ATCATCGCCC CGCTGCTGGT GCCCGTCCTG CTGCCGGGCA TCGGGGCGGC GGGAGTCTTC GCGGTGTTCG CCGTGGCCTT CTGCCTGGCG GCCCTGGCGA CGACGCTGCT GCCGGACCGC ACGGGGGTCG CGCTGGAGAC CTGA
|
Protein sequence | MATLSRPALP PSGGRPAGGL QTPDQNATQA ADLGQRLGGL RFNAQHRKLI TGSGVGWALD AMDVGLISFV MAALAAEWGL GKTELSWVAS IGFLGMAIGA TFGGLLADRF GRRNVFAATL LVYGLATGAS ALAWSLGALL AFRFLVGLGL GAELPVASTL VSELSPTRIR GRMVVALESF WAVGWILAAA IGYFVVPDFG WRWALALGVV PALYAAVIRW GLPESPLWLA SQGRSAEAER VVRRFEDAAP THTAPADPAA PDAPPTPRAP ADAGSTRRAN RVTEGLWSGR FARRTVGIWA IWFLVNFSYY GAFIWLPTLL VDRGFDIVQS FGYVLIMTLA QLPGYLLAAV LIEVWGRRAT LATFLAGSAA SAVLFGMADS LPVLLATGAA LSFFNLGAWG ALYAVTPEIY PTRLRGSGAG AAAGFGRIAS IIAPLLVPVL LPGIGAAGVF AVFAVAFCLA ALATTLLPDR TGVALET
|
| |