Gene Ksed_21330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21330 
Symbol 
ID8373637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2200703 
End bp2202136 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content74% 
IMG OID644992380 
Productsugar phosphate permease 
Protein accessionYP_003149887 
Protein GI256825927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.428425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00018034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCACGT TGTCGCGCCC TGCCCTTCCC CCCTCCGGCG GGCGACCCGC GGGAGGGCTG 
CAGACCCCCG ACCAAAACGC CACCCAGGCA GCTGACCTGG GCCAGCGCTT GGGCGGGCTG
CGCTTCAACG CCCAGCACCG CAAGCTCATC ACCGGGTCCG GGGTCGGCTG GGCCCTGGAC
GCCATGGACG TGGGCCTCAT CTCGTTCGTG ATGGCCGCCC TGGCCGCGGA GTGGGGGCTG
GGCAAGACCG AGCTCTCCTG GGTGGCCTCC ATCGGCTTCC TCGGCATGGC GATCGGTGCA
ACCTTCGGCG GGCTGCTGGC CGACCGCTTC GGGCGCCGCA ACGTCTTCGC GGCGACCCTG
CTGGTCTACG GCCTGGCCAC CGGCGCCAGC GCCCTGGCCT GGTCGCTGGG GGCGCTGCTC
GCCTTCCGCT TCCTGGTGGG GCTGGGGCTG GGGGCGGAGC TCCCGGTGGC CTCGACGCTC
GTCTCGGAGC TGTCCCCCAC CCGTATCCGG GGCCGCATGG TGGTCGCCCT GGAGTCCTTC
TGGGCCGTGG GCTGGATCCT CGCCGCGGCC ATCGGCTACT TCGTCGTGCC GGACTTCGGG
TGGCGCTGGG CCCTCGCCCT GGGTGTGGTG CCTGCCCTCT ACGCGGCCGT CATCCGATGG
GGTCTGCCCG AGTCGCCGCT CTGGCTCGCC TCCCAGGGGC GTAGCGCTGA GGCCGAACGG
GTCGTCCGCC GCTTCGAGGA CGCGGCGCCC ACCCACACCG CGCCCGCCGA CCCCGCCGCA
CCCGACGCCC CGCCCACCCC GCGCGCCCCC GCCGATGCGG GGAGCACCCG CCGCGCGAAC
CGGGTCACCG AGGGCCTGTG GTCCGGTCGG TTCGCGCGCC GCACGGTGGG CATCTGGGCC
ATCTGGTTCC TGGTCAACTT CTCGTACTAC GGCGCCTTCA TCTGGCTGCC GACCCTGCTC
GTGGACCGCG GCTTCGACAT CGTGCAGTCC TTCGGGTACG TCCTGATCAT GACGCTGGCC
CAGCTGCCGG GCTACCTGCT GGCGGCCGTG CTCATCGAGG TCTGGGGGCG CCGCGCGACC
CTGGCCACCT TCCTGGCCGG CTCCGCGGCC TCGGCGGTCC TGTTCGGCAT GGCGGACTCG
CTGCCGGTGC TGTTGGCCAC CGGTGCGGCG CTGTCCTTCT TCAACCTCGG CGCCTGGGGT
GCGCTCTACG CGGTCACCCC GGAGATCTAC CCCACCCGCC TGCGGGGGTC CGGTGCCGGG
GCGGCGGCGG GTTTCGGCCG CATCGCCAGC ATCATCGCCC CGCTGCTGGT GCCCGTCCTG
CTGCCGGGCA TCGGGGCGGC GGGAGTCTTC GCGGTGTTCG CCGTGGCCTT CTGCCTGGCG
GCCCTGGCGA CGACGCTGCT GCCGGACCGC ACGGGGGTCG CGCTGGAGAC CTGA
 
Protein sequence
MATLSRPALP PSGGRPAGGL QTPDQNATQA ADLGQRLGGL RFNAQHRKLI TGSGVGWALD 
AMDVGLISFV MAALAAEWGL GKTELSWVAS IGFLGMAIGA TFGGLLADRF GRRNVFAATL
LVYGLATGAS ALAWSLGALL AFRFLVGLGL GAELPVASTL VSELSPTRIR GRMVVALESF
WAVGWILAAA IGYFVVPDFG WRWALALGVV PALYAAVIRW GLPESPLWLA SQGRSAEAER
VVRRFEDAAP THTAPADPAA PDAPPTPRAP ADAGSTRRAN RVTEGLWSGR FARRTVGIWA
IWFLVNFSYY GAFIWLPTLL VDRGFDIVQS FGYVLIMTLA QLPGYLLAAV LIEVWGRRAT
LATFLAGSAA SAVLFGMADS LPVLLATGAA LSFFNLGAWG ALYAVTPEIY PTRLRGSGAG
AAAGFGRIAS IIAPLLVPVL LPGIGAAGVF AVFAVAFCLA ALATTLLPDR TGVALET