Gene Ksed_21030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21030 
Symbol 
ID8373607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2175663 
End bp2176553 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID644992352 
Producttranscription antitermination protein nusG 
Protein accessionYP_003149862 
Protein GI256825902 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0843287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC AGACGCCCGA TCCGGCGACC GAGGTCGAGG CCGACCAGGC CGTCGAGGAG 
GCCACCGTGG CCGATGAGGT CGAGGTGGCC GGGGCTGACG CTGCCCCGCA GCCCGACGAG
GCCCCCGAGG GTGACTCCGT GGACGCCGCG GACGACGAGG CCGCTGCCGA CGCCGCTGAC
GAGTCCGCCG CCGACGCGGA GGGGGACGCG ACCGACGAGG CTGCCGCCGA GGGGGAGTCC
GACGAGGACG CCACCCCCAC CGCCGAGGAC CAGGCCGCCG AGTTCCGCGA CATGCTGCGT
GGCCAGTTCG GTGACTGGTA CGTGCTCCAC ACCTACGCCG GCTACGAGAA GCGGGTGAAG
GCCAACCTGG AGCAGCGTGC GGTCTCCATG AACATGGAGG ACTACATCTT CCAGGCCGAG
GTGCCCATGG AGACGGTCAC CGAGATCAAG AACAACCAGA AGAAGACCGT CGAGCGCGTC
CGCATGCCCG GGTACTGCCT GGTGCGCATG GACCTGACGA ACGCCTCCTG GGGCACCGTC
CGCAACACCC CGGGTGTGAC CGGATTCGTC GGCAACGCCA CTGACCCGGT GCCGCTGAGC
CTCGGCGAGG TCTTCGACAT GCTGGCCCCC GACTTCGAGT CGCAGGCCCA GGCCGCTGCC
GGCTCCCAGG AGGGCGCCAC CACGGTGGAG CCGAAGTCCG GCACCCCCCA GATGCCACTC
GTCGACTTCG AGGTCGGCGA GGCCGTCACC GTCATGGAGG GTCCGTTCGA GACCCTTCCT
GCCACGATCT CCGAGATCAA CGTCGAAGCA CGCAAGGTGC AGGTGCTGGT CTCGATCTTC
GGCCGGGAGA CCCCGGTCGA GCTCGCGTTC AACCAGGTCG CCAAGATCTG A
 
Protein sequence
MSEQTPDPAT EVEADQAVEE ATVADEVEVA GADAAPQPDE APEGDSVDAA DDEAAADAAD 
ESAADAEGDA TDEAAAEGES DEDATPTAED QAAEFRDMLR GQFGDWYVLH TYAGYEKRVK
ANLEQRAVSM NMEDYIFQAE VPMETVTEIK NNQKKTVERV RMPGYCLVRM DLTNASWGTV
RNTPGVTGFV GNATDPVPLS LGEVFDMLAP DFESQAQAAA GSQEGATTVE PKSGTPQMPL
VDFEVGEAVT VMEGPFETLP ATISEINVEA RKVQVLVSIF GRETPVELAF NQVAKI