Gene Ksed_20700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20700 
Symbol 
ID8373574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2144726 
End bp2145424 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID644992319 
ProductSSU ribosomal protein S5P 
Protein accessionYP_003149829 
Protein GI256825869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.950879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CTCAGCAGGG AGGCGAGCTC ACCGGCGCAG AGGCTCAGAA GACCAGCGCT 
GGTGACCGCA CCAACGAGCG GTCCGGCAAC GACCGCAACG ACCGCGGTGG CCGCGGCGGC
AACGACCGTG GTGGCCGTGG TGGCCGCGGT GGCCGTGACG GCGGTCGCGA CGAGGGCAAC
CAGTACCTCG AGCGCGTCGT CACCATCAAC CGCGTCGCCA AGGTCGTGAA GGGTGGTCGT
CGCTTCAGCT TCACCGCCCT GGTCGTGGTG GGCGACGGTG ACGGCAACGT CGGCGTCGGC
TACGGCAAGG CCAAGGAGGT GCCGCTGGCG ATCTCCAAGG GTGTCGAGGA GGCGAAGAAG
AACTTCTTCC GCGTCGCCCG CATCGGCGGC ACCATCCCGC ACCCCACTCA GGGTGAGGAT
GCTGCCGGCA TCGTCATGCT CCGTCCGGCC TCGCCGGGTA CCGGTGTGAT CGCCGGTGGT
CCGGTCCGCG CCGTCCTGGA GTGCGCCGGC ATCCACGACG TGCTCACCAA GTCGTTGGGT
TCGGACAACC AGATCAACAT CGTGCACGCC ACGGTGAAGG CACTGAAGCA GCTCGAGCAG
CCGGAGGCCG TGGCCGCGCG CCGTGGTCTG CCGCTCGAGG ACGTGGCCCC GGCCGCGATG
CTGCGCGCCC GTGCCGCGGC TGCCGGAGAG GGGGCCTGA
 
Protein sequence
MAETQQGGEL TGAEAQKTSA GDRTNERSGN DRNDRGGRGG NDRGGRGGRG GRDGGRDEGN 
QYLERVVTIN RVAKVVKGGR RFSFTALVVV GDGDGNVGVG YGKAKEVPLA ISKGVEEAKK
NFFRVARIGG TIPHPTQGED AAGIVMLRPA SPGTGVIAGG PVRAVLECAG IHDVLTKSLG
SDNQINIVHA TVKALKQLEQ PEAVAARRGL PLEDVAPAAM LRARAAAAGE GA