Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_20470 |
Symbol | |
ID | 8373551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2124888 |
End bp | 2125757 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644992296 |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003149806 |
Protein GI | 256825846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0780045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.389193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC AGCCGACCTC CACCAAGGGC AAGTGGCCCC TGTTCCTCAT CTCGCTGCTG GTGATCGCCT ACACGATGAT CCCGCTGCTG TGGATGTTCG CCCTGTCCGT CAAGAGCGAC GCGGCCCAGT CGAACACCGA GCTCAACACC TTCGGCAACT TCTGGCCCAC CGGCGAGGGG TTCACCTGGG ACAACTACAC GCTGATCCTC ACCGGCGACG CGCAGCCGCT GTTCGTCCCG GCGCTGATCA ACTCGATCGT GATCTGCCTT CTGGCCACCG TGATCTCGGT GGCGCTCGCC ACGCTGTGTG CGTACGCGAT CAGCCGGCTG AAGTTCCCCG GCAAGGGCAT GATCCTGTTC ACCGCGCTGA CGGTCAGCTT CTTCCCCGTG GTCTCGCTGG TGACGCCGAT CTTCAACGTG TGGCGCACCA TCGGCCTGTT CGACACCATC CCCGGCCTGG TCATCCCCTA CCTGTCGCTC ACGCTCCCGC TGGCCATCTG GACGCTGACG GCGTTCTTCC AGCAGATCCC GTGGGAGATG GAGCAGGCGG CCCAGGTGGA CGGTGCCACC AGCTGGCAGG CCTTCCGCAA GGTGATCGTG CCGCTGGCCC TGCCGGGTGT GTTCACCACG GCCATCATCG TGTTCTTCAC CGCATGGAAC GACTTCGTGT TCGCGGTGTC GTTGTCCAGT GAGCAGGCAC GCACCGTGCC GGCCGCGCTG GCCTTCTTCA CCGGCGCGAG CCAGTTCCAG CAGCCGACCG GCGCCATCGC AGCGGCCTCG GTCATCGTCA CCATCCCGGT GGTCATCCTG GTGCTGCTCT TCCAGCGCCA GATTGTCGCC GGCCTCACCT CGGGAGCCGT CAAGGGCTGA
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Protein sequence | MADQPTSTKG KWPLFLISLL VIAYTMIPLL WMFALSVKSD AAQSNTELNT FGNFWPTGEG FTWDNYTLIL TGDAQPLFVP ALINSIVICL LATVISVALA TLCAYAISRL KFPGKGMILF TALTVSFFPV VSLVTPIFNV WRTIGLFDTI PGLVIPYLSL TLPLAIWTLT AFFQQIPWEM EQAAQVDGAT SWQAFRKVIV PLALPGVFTT AIIVFFTAWN DFVFAVSLSS EQARTVPAAL AFFTGASQFQ QPTGAIAAAS VIVTIPVVIL VLLFQRQIVA GLTSGAVKG
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