Gene Ksed_20120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20120 
Symbol 
ID8373516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2093414 
End bp2094085 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID644992263 
ProductcAMP-binding protein 
Protein accessionYP_003149773 
Protein GI256825813 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00290987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0142715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGG ACCTCTGCGT GACCCAGGTG CCGATCTTCG CCGGCCTCGA CCCGGAGGCC 
CAGCAACAGG TGGCCTCCTG CGCGCACCCC GAGATGGTGG AGGCCGGGCA CGACTTCTAC
CGGCAGGGCG AGGAGGTCGG TCAGCTGTTC GTGCTGCACG AGGGAACGGT GAAGCTGACC
CACGGCCGGG CCGACGGCAC CCAGCGGATC GTCCGCACGG TGGCCCCCGG GCAGGTGGTG
GGGGAGCACC CCTTGCTGGC CGGTGGGCCC GCCGACCACA CGGCCACCGC GATCGAACCG
GTCGTGGCCT GCGTGTTCCA GCACGACCAG CTCGCGGGGC TGATGGGGGA GCACCCGCGC
ATCACGCGCG ACCTGCTCGG GGCCATGAGT CGGCGGCTGG CCGACGCCGA GCAGCGCATC
GCCCGCCTGA CCAGCACCGA CATGGCAGCC CGCCTGGCCG ACTACCTGCT GGACCTGCCG
GCCGCCGTGC AGGGACGGGA CGTCCGGGTG AGCCTGCCCA TGCGCAAGCG GGAGGTGGCC
TCCTACCTGG GTGTCACGCC CGAGTCGTTC AGCCGTGCCC TGGCACGGCT GGAGAAGCGG
GGCCTGGTCG AGGTCTCCGG TGCCGAGATC GCCCTGCTCG ATCTGGACGG GTTGACCGAG
CTGGCAGGCT GA
 
Protein sequence
MPQDLCVTQV PIFAGLDPEA QQQVASCAHP EMVEAGHDFY RQGEEVGQLF VLHEGTVKLT 
HGRADGTQRI VRTVAPGQVV GEHPLLAGGP ADHTATAIEP VVACVFQHDQ LAGLMGEHPR
ITRDLLGAMS RRLADAEQRI ARLTSTDMAA RLADYLLDLP AAVQGRDVRV SLPMRKREVA
SYLGVTPESF SRALARLEKR GLVEVSGAEI ALLDLDGLTE LAG