Gene Ksed_20040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20040 
Symbol 
ID8373508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2083332 
End bp2084195 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content76% 
IMG OID644992255 
ProductNifC-like ABC-type porter/molybdate ABC transporter, permease protein 
Protein accessionYP_003149765 
Protein GI256825805 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter
[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0133596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGC CCACCCCACC GGTCTCCCGT CGGTCCGGCA CCGACTGGTC AGCCGCGCCG 
CTGGCGCTGC TGGCGGCCGC GGCCGTGGCC CTCGTGGCCG TGCCGCTGGT GGCGCTCCTG
CTTCGGGCCG ACTGGGTCGC GATGCCCGGG GTGCTGGGGC GGGAGTCGGT CCAGCAGGCC
CTCGTGCTCT CGCTGACCAG CTCGAGCGTG GCCACGGCGC TCTCGGTCCT GTGCGGCGTC
CCCCTGGCCT GGTGGCTGGC AGCGAGCGAC CAGCGGGGAG CGTTCCGCCG CCGGGTGGCC
GCCGGGGTGC GCGCCCTGGT GACCCTGCCC CTGGTCCTGC CCCCGGCCGT CGGCGGTGTC
GCCCTGCTCA TGGCCTTCGG GCGCACCGGG CTCCTGGGGC AGCGGCTCGA CGCCTGGTTC
GGCGTCACCC TGCCCTTCAC CCCGGCCGCG GTGGTGCTGG CCCAGACCTT CGTGGCGATG
CCCTTCCTCG TGACCACCGT GGACGGTGCC CTCGCCCAGC GGGACCGCAG CCTCGAGGAG
GCGGCCTGGA CGTGCGGGGC CGACGCCTGG CAGACCTTCC GCCGCGTCAC CCTGCCGCTG
GCCCTGCCCT CGCTCGTGGC AGGCACCGTC CTGTGCTGGG CGCGGGCGCT GGGGGAGTTC
GGGGCCACCA TCGTGTTCGC CGGCAACCTG CCCGGCAGCA CGCAGACGAT GCCGCTGGCC
GTCTACCTCA CGATGCAGAC GGACCCGCAG GCCGCGATCA CCCTGAGCGT GGTGCTCCTG
CTCGTCTCGG CGCTGGTCAT CGTGGCCCTG CGCGGGCGGT GGGCCGGTGG GCTGTCCCGC
TTCACCAGCC GCCGGGCGGG CTGA
 
Protein sequence
MTRPTPPVSR RSGTDWSAAP LALLAAAAVA LVAVPLVALL LRADWVAMPG VLGRESVQQA 
LVLSLTSSSV ATALSVLCGV PLAWWLAASD QRGAFRRRVA AGVRALVTLP LVLPPAVGGV
ALLMAFGRTG LLGQRLDAWF GVTLPFTPAA VVLAQTFVAM PFLVTTVDGA LAQRDRSLEE
AAWTCGADAW QTFRRVTLPL ALPSLVAGTV LCWARALGEF GATIVFAGNL PGSTQTMPLA
VYLTMQTDPQ AAITLSVVLL LVSALVIVAL RGRWAGGLSR FTSRRAG