Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_19890 |
Symbol | |
ID | 8373493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2073085 |
End bp | 2076009 |
Gene Length | 2925 bp |
Protein Length | 974 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644992241 |
Product | P-type ATPase, translocating |
Protein accession | YP_003149751 |
Protein GI | 256825791 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0486105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0039652 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGTCACG CCGCATCGTT CAGCACCCCG GTCGTCGCCG ATCAGGAGCG CGACTGGGCC CTGGTCGACG GGCCGGAGGT GGCCACCGAG CTGGGGACGG ACCCCGAGCA CGGTCTGAGC TCGGCCGAGG CCGCCACCCG GCTGGCGCAG CACGGCCCCA ACGAGCTCGA CGCCGAGCCC CCGGAACCGG CCTGGAAGCG CCTCGCCCGC CAGTTCTCCG ACCCGCTGAT CCACCTGCTC CTGGCCGCCA TCGTCATCTC GGTGGCGGCC TGGTGGTTCG AGGGGGCCCA AGGCCTCCCG GTCGACGCCG TGGTCATCCT GCTCATCGTG GTCGCCAACG CGATCATCGG CTACGTCCAG GAGGGCAAGG CCGCCGACGC GGTGGCCGCC CTGCAGCGGA TGTCCGAGGT GACCGCCGGG GTGGTGCGCG ACGGCCAGCA GCTGCGCGTC CCCGCCACCG AGGTGGTCCC CGGTGACCTG CTGGTCCTCG CCGAGGGCGA CTCGGTCCCG GCCGACGCCC GCCTCCTGCG CGCCTCCTCG CTGCAGGTGG CCGAGGCCTC GCTGACCGGG GAATCCCAGC CGGTCACCAA GTCCCCGGCC ACGCTCGCCG AGCACGTCCC GCTGGGCGAC CGGACGAACA TGGTCTTCAA GGGCACCGCG GTCACCCAGG GACTGGGGCG GGCCGTGGTG ACCGAGACCG GCATGGGCAC CGAGATGGGG CACATCGCCC GGATGCTCAA CGAGACCGAG CAGGAGTCCA CCCCGCTGGA GAAGGAGATC GCCGGCGTCG GCAAGGTGCT CGGCCGGTCG GTCATCGTCA TCGCCCTGGT GGTCATGGGG GCGGTCGCGC TCACCAGCGA CATCCGCACC GCCCAGGACG CCGTCGACGT GCTCCTGCTC GGCGTCTCGC TGGCCGTGGC CGCCGTCCCC GAGGGGTTGC CGGCGATCCT CTCGCTCGTG CTCTCCATCG GCGTGCAGGC GATGAGCCGG CGCAACGCCA TCATCAAGTC GCTCTCCTCG GTGGAGACGC TCGGCTCGGC CTCGGTGATC TGCTCGGACA AGACCGGCAC CCTGACCCGC AACGAGATGA CGATGGTGCG GGTCCGCTCC CGCTCCGGCG CGGCCGAGAT CAGCGGGGTC GGCTACGCAC CGGAGGGGGA TGTGCTCGTC GAGGGGTCCC CGCTGCTGGA GCAGGACCCC GAGCTGGACC TGCGCGAGGA GGACATCGTC GTCCTCAGCG GCGGCACCCT GGCCTCGGAC GCCGAGGTCC GGCAGGAGGA GGACGGCTCG TGGTCGGTCA TCGGCGACCC CACCGAGGCG GCCTTCGTCG TGGCCGAGCA GAAGGCCGGC CTGACCCAGC GGCGGCAGGA GCGGTTCACC CGGATCGGGG AGGTGCCCTT CACCTCGGAC CGCAAGATGA TGTCGGTGGT CGTCGAGGAC GCCGACCACA CCGACGCGGA GGGCCGCGTC CAGCGGACCC TCGTCGCCAA GGGCGCCCCC GACGTGCTGC TCGAGCACTG CACCCGGGCC CGGGAGGGGG AGCGCGTCGT GGATCTCACC GCCGCCGACC GGGAGCAGGT GGAGCGCGAC GTCGCCGAGA TGTCCGACCA GGCCCTGCGT ACCCTCGCCG TGGCCTACCG GCCGCTGGAG CCGGGGGAGT ACGAGGCGGC CCTGGCCGGC GACGGCTCCC TCGACGGCGA GGCGGGCCTG GCGCTCGAGG AGGGGCTGAT CCTCGTCGGG ACGGTCGGCA TCATCGACCC GCCCCGCACC GAGGCCGCCG AGGCCGTGGC CGAGGCGCAT CGGGCCGGCA TCCGCGTCGT GATGATCACC GGGGACCACC CGGCCACCGC CCTGCGGATC GCCCAGGAGC TCGGCATCGT CGGGCAGGGC GCCCGGGCGG TCGCCGGTCC GGAGCTCGAC GGGATGGACG ACGCGCAGCT GCGCGAGGTG GTCCGGGAGG TCTCCGTCTT CGCCCGGGTG GCTCCGGAGC ACAAGCTCCA GCTCATCGCC GCCCTGCAGG CCGAGGGGCA GATCGTCTCC ATGACCGGCG ACGGGGTGAA CGACGCCCCG GCCCTGCGCA AGGCCGACAT CGGGGTGGCG ATGGGCGTCA CCGGGACCGA GGTCTCCAAG CAGGCCGCGG ACATGATCCT CGTGGACGAC AACTTCTCCA CGATCGTCTC CGCGGTGCGG CAGGGGCGGG TGATCTTCGC CAACATCCGC AAGTTCCTGC GCTACCTGCT CTCCTCGAAC ATGGGTGAGG TCCTCACGAT GTTCCTCGGC GTGATGCTCG CCGAGTACCT CGGCCTGACC GGCCACGGGG AGGCCGTCGT CGCCCCACTG CTGGCCACGC AGATCCTCTG GATCAACCTC GTCACCGACT CGGCGCCGGC GCTCGCGATG GGGATCGACC CCGAGACCGA GGACGTCATG GCCGCCCGAC CCCGCCCGCT CTCCGAGCGG GTCATCAACA CCCGGATGTG GACTGGGATC CTCACCATCG GCCTGGTGAT GGCCGTGGTG ACCCTGCTGG CCCTGGACAT GGAGCTGCCC GGCGGGCTCG TCGAGGGGCA CCAGTCGGTG GAGAACGCCC GCACCGCGGC CTTCACCACG CTGGTGCTCG CGCAGCTGTT CAACGCGCTG AACTCGCGCT CGGAGACCGT CTCGGCCTTC CACCGCCTCT TCACCAACCG CTGGCTGTGG CTGTCGCTGG CCTTCGGCCT GGTCTCGCAG GTGGCCGTGG TGCACGTGCC CTTCCTGCAG GCGGCCTTCG GCACCGAGGC GCTCACCCTC GACCAGTGGC TGAAGTGCCT GGCCCTGGCC TCGTGCGTGC TCTGGTTCGA CGAGCTCCGC AAGGTGGTGC TCCGCTGGCG TGGTGAGCCT GCCCCGGCCG AGCCCACACC GCGCTTGGAA CCTGCCCTGA CCTGA
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Protein sequence | MGHAASFSTP VVADQERDWA LVDGPEVATE LGTDPEHGLS SAEAATRLAQ HGPNELDAEP PEPAWKRLAR QFSDPLIHLL LAAIVISVAA WWFEGAQGLP VDAVVILLIV VANAIIGYVQ EGKAADAVAA LQRMSEVTAG VVRDGQQLRV PATEVVPGDL LVLAEGDSVP ADARLLRASS LQVAEASLTG ESQPVTKSPA TLAEHVPLGD RTNMVFKGTA VTQGLGRAVV TETGMGTEMG HIARMLNETE QESTPLEKEI AGVGKVLGRS VIVIALVVMG AVALTSDIRT AQDAVDVLLL GVSLAVAAVP EGLPAILSLV LSIGVQAMSR RNAIIKSLSS VETLGSASVI CSDKTGTLTR NEMTMVRVRS RSGAAEISGV GYAPEGDVLV EGSPLLEQDP ELDLREEDIV VLSGGTLASD AEVRQEEDGS WSVIGDPTEA AFVVAEQKAG LTQRRQERFT RIGEVPFTSD RKMMSVVVED ADHTDAEGRV QRTLVAKGAP DVLLEHCTRA REGERVVDLT AADREQVERD VAEMSDQALR TLAVAYRPLE PGEYEAALAG DGSLDGEAGL ALEEGLILVG TVGIIDPPRT EAAEAVAEAH RAGIRVVMIT GDHPATALRI AQELGIVGQG ARAVAGPELD GMDDAQLREV VREVSVFARV APEHKLQLIA ALQAEGQIVS MTGDGVNDAP ALRKADIGVA MGVTGTEVSK QAADMILVDD NFSTIVSAVR QGRVIFANIR KFLRYLLSSN MGEVLTMFLG VMLAEYLGLT GHGEAVVAPL LATQILWINL VTDSAPALAM GIDPETEDVM AARPRPLSER VINTRMWTGI LTIGLVMAVV TLLALDMELP GGLVEGHQSV ENARTAAFTT LVLAQLFNAL NSRSETVSAF HRLFTNRWLW LSLAFGLVSQ VAVVHVPFLQ AAFGTEALTL DQWLKCLALA SCVLWFDELR KVVLRWRGEP APAEPTPRLE PALT
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