Gene Ksed_19100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19100 
Symbol 
ID8373415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1986261 
End bp1986857 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content73% 
IMG OID644992165 
Productpredicted metal-dependent hydrolase 
Protein accessionYP_003149675 
Protein GI256825715 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.155698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.193452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGGG AAGCCATCGA TGGGGGAGCC CAGCGGCGGG ACGACGGCTG GGAGGGGACC 
TTCGGCCCCG GCGAGCCCGT CGTTCCACAG GCACCGCAGC CCGAGGTCGT GATCACCCGC
AGTGAGCGGC GCCGCAAGAC GCTCTCGGCG CGGTGGGTGG ACGGCGTGGT CGAGGTGGCC
GTGCCGGCCG GCATGAGCCC GCAGGCCGAG GCCGACGCGG TGCACGCCCT GGTGCAGAAG
ATGGTGCGGC GAAGGGCCAA CGAGGCCGAC CAGGGGGCGC TGGAGCGCCG GGCCCACCGG
CTCAACCGCA GCTACTTCGA GGGACTGGCC ACCCCGGCCG AGATCCGGTG GGTGACCAAC
CAGCAGGCCC GGTGGGGTTC GTGCCACACG GGGCGGCGGA CCATCCGCAT CAGCGACGCG
GTGCAGGGCA TGCCGGACTG GGTGGTCGAC GCGGTGGTCG TCCACGAACT GGCGCACCTC
GTGGAGGCCA ACCACGGGCC GGCGTTCAAG GCACTCGTGC AGCGTTACCC GCGGTACGCC
GACGCGATGG TCTTCCTGTC CGGCGTCTCC CATGGGTGGG CCCACCCGCA GGGGTGA
 
Protein sequence
MWGEAIDGGA QRRDDGWEGT FGPGEPVVPQ APQPEVVITR SERRRKTLSA RWVDGVVEVA 
VPAGMSPQAE ADAVHALVQK MVRRRANEAD QGALERRAHR LNRSYFEGLA TPAEIRWVTN
QQARWGSCHT GRRTIRISDA VQGMPDWVVD AVVVHELAHL VEANHGPAFK ALVQRYPRYA
DAMVFLSGVS HGWAHPQG