Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18580 |
Symbol | |
ID | 8373363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1933235 |
End bp | 1933735 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644992114 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme |
Protein accession | YP_003149625 |
Protein GI | 256825665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0014086 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.811486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGTGC CCGCCGCGCT GAGGGAGGCC GACGCGACCA CGCGGTTCAC CCTCGACCAG GTGTCGGTGC TCACCAACCG CCGTGGGGCC CTGCGCGGCT TCCACGTTGC GGAGCACCCG GGGCACACGA AGCTCATCAC GTGCGCAGCG GGGGCCGTCT GGGATGTGCT GATCGATCTG CGCCAGGACA GCCCGACCTT CCGTGGAGTG GCCGAGGTGC ACGTGGAGGG GAGCGATCCG ACGGCGGTCC TCTGCCCCGC CGGGGTGGCG CACGGATTCC TCTCCCTGAC CGAGGGATCC GTGGTCCTGA TCGGCGTTGA CGACAACTTC GCGGGGGTGA CGGAGCACGG TTTCGATGCC CTGGACCCTG CACTGGGTGT CCGGTGGCCC CTGCCGGACG ATGACTTCAT CCGCTCGGCT CGTGACGCCT CGGCTCCTCC GTTGGCCGAT CTGCTGGGGT CCGGCTTCCG GTTCCCGTCC GGGCACCCTA CTTCGGGCTG A
|
Protein sequence | MLVPAALREA DATTRFTLDQ VSVLTNRRGA LRGFHVAEHP GHTKLITCAA GAVWDVLIDL RQDSPTFRGV AEVHVEGSDP TAVLCPAGVA HGFLSLTEGS VVLIGVDDNF AGVTEHGFDA LDPALGVRWP LPDDDFIRSA RDASAPPLAD LLGSGFRFPS GHPTSG
|
| |