Gene Ksed_18370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18370 
Symbol 
ID8373342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1908665 
End bp1909915 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content69% 
IMG OID644992094 
ProductSPFH domain, Band 7 family protein 
Protein accessionYP_003149606 
Protein GI256825646 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.848038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAAG TCATCACAGC AGTGGTCCTG ATACTGCTGC TCCTGTTCGT CGTCGTGGTG 
CTGGTGCGAT CGATCATGAT CGTGCCGCAG GCCACTGCGG TGATCGTGGA GCGCCTGGGC
CGCTACAGCA AGACGCTGGA CGCCGGCCTG AACCTGCTCA TCCCGTTCGT CGACAAGTCG
CGCGCCCGCG TCGACCTGCG TGAGCAGGTC GTCAGCTTCC CGCCGCAGCC GGTGATCACC
AGCGACAACC TGGTGGTCTC CATCGACACC GTCATCTACT TCCAGGTCAC CGACCCGAAG
TCCGCCACCT ACGAGATCGC GAACTACATC TCGGGTATCG AGCAGCTCAC GGTCACCACC
CTGCGAAACG TGATCGGTTC GCTGGACCTG GAGCAGACCC TGACCAGCCG CGACCAGATC
AACGGCCGCC TGCGCGGCGT GCTGGACGAG GCCACCGGCC GCTGGGGCAT CCGCGTGAAC
CGCGTGGAGC TCAAGGCGAT CGACCCGCCG CCCAGCGTGC AGGACTCGAT GGAGAAGCAG
ATGCGCGCCG AGCGTGACCG TCGCGCGGCC ATCCTGAACG CCGAGGGTGT GAAGCAGTCG
CAAATCCTGA CGGCCGAGGG TGAGAAGCAG GCAGCCATCC TGACCGCCGA GGGTGACGCG
CAGGCCTCGG TGCTGCGCGC CCAGGGTGAG TCGCGCGCCA TCATGCAGGT GTTCGACGCC
ATCCACCGCG GCAACCCGAA CAGCAAGGTC TTCGCCTACC AGTACCTGCA GGCGTTGCCC
AAGATCTCCG AGGGCGAGGC GAACAAGATG TTCTTCTTCC CCAGCGAGAT CACCGACGCG
CTCAAGGGCG TGGGCGGCGT GCTGGGCGGC CAGCCCGGGC TCGACGACGG GCGCGGTTCG
GTCCACGAGA CCAACACGAT GGGCGAGCCG ATGACGCTCG ACATCGAGGA GACCAACCTG
GAGGACCCGG CCGAGGCGCT GCGCAAGGCG CGCGCAGAGG CCCGTGGCGC CACCGACGAG
GTCGCCGACT CGGCCACCGC TCGACGCGGT TCCGCTGCGG GCATGGGCGG TCTGGGCGGC
TCCACCCCGG CAGGTGGCTC GGCCATCCAG AGCAACCCGG GGCTGGACAC GCACGCGGAC
GACGAGCCGC AGCGCAACTC TCCCATGCGG GACGACCAGC CGGGCCGTGA GCCCGGTCAG
GGTGGCCAGC AGTGGCCGCA GGACGGCCCC GAGGGTCGCC CGCAGGGCTG A
 
Protein sequence
MPEVITAVVL ILLLLFVVVV LVRSIMIVPQ ATAVIVERLG RYSKTLDAGL NLLIPFVDKS 
RARVDLREQV VSFPPQPVIT SDNLVVSIDT VIYFQVTDPK SATYEIANYI SGIEQLTVTT
LRNVIGSLDL EQTLTSRDQI NGRLRGVLDE ATGRWGIRVN RVELKAIDPP PSVQDSMEKQ
MRAERDRRAA ILNAEGVKQS QILTAEGEKQ AAILTAEGDA QASVLRAQGE SRAIMQVFDA
IHRGNPNSKV FAYQYLQALP KISEGEANKM FFFPSEITDA LKGVGGVLGG QPGLDDGRGS
VHETNTMGEP MTLDIEETNL EDPAEALRKA RAEARGATDE VADSATARRG SAAGMGGLGG
STPAGGSAIQ SNPGLDTHAD DEPQRNSPMR DDQPGREPGQ GGQQWPQDGP EGRPQG