| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_18360 |
|---|
| Symbol | |
|---|
| ID | 8373341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1908172 |
|---|
| End bp | 1908597 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644992093 |
|---|
| Product | membrane protein implicated in regulation of membrane protease activity |
|---|
| Protein accession | YP_003149605 |
|---|
| Protein GI | 256825645 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 0.54278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGGTGGC TCGGCGCCGC CCTCGCCTTG GGCGCCGTGG AGATGATGAC ACTCGACTTC
ATGTTCCTGA TGCTGGCGAT CGGCGCCCTC GTGGCGATGG TCCTGGCCGC CCTGGGCCTG
GGTTTCACCG GCCAGGTGGT CACCTTCGCC CTGGCCTCGC TGCTGCTGCT CTTCCTCGTG
CGCCCGGTGC TCAAGCGCCG CCTGTTGGAG AACACCCCGC TGGCCGTGAC CAACGCCGCG
GCGCTGAAGG GCCGCGACGC CCTGGTCACC GAGCCCGTCA CCGAGCTGGC CGGCACCGTG
AAGCTCGCCG GTGAGACGTG GACGGCCCGC CCGCAGTGGG ACGGTGAGAC CTTCGCCATC
GGCGAGCGCG TCCGCATCGC CCGCATCGAG GGTGCGACGG CCCGCATCGA GCGCCTCGCG
GCCTGA
|
|---|
| Protein sequence | MWWLGAALAL GAVEMMTLDF MFLMLAIGAL VAMVLAALGL GFTGQVVTFA LASLLLLFLV
RPVLKRRLLE NTPLAVTNAA ALKGRDALVT EPVTELAGTV KLAGETWTAR PQWDGETFAI
GERVRIARIE GATARIERLA A
|
|---|
| |