Gene Ksed_18050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18050 
Symbol 
ID8373310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1876984 
End bp1878717 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content70% 
IMG OID644992062 
Producthypothetical protein 
Protein accessionYP_003149574 
Protein GI256825614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000000418777 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.174472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA CCACAACCGC GTCGACCCAG TCGACGACCG ATGATGCCGT CGCGGTAGCC 
CGGGAAGCCT TCGCGGCCGT GCACACCGCC GCCGACCACG CCCTGGCCGC GGTCGCGGCA
CTGGGGTCGA CCGACCTGCC GTTGGACGTG GCGACCTTGG AGTGGCTCGT CCAGGAAGCC
CAACGCGTGG TCAACCGGCA CGACCGGATC AGGATCCGCG CCCTGGATGT GGTGCGTCGT
ACCCGGGAGG CTGGCGGGTC GCACCACGAC AACGACGCCC AGTTCACCGC CGGACGCACC
CACACCGACC CCCGAGGCGC CGCCCGCGAC ACCCACCTCG CCAAAGCCCT CGGCAACCAA
CCCCCCACAC CCCCGCCAAA CGGTCCCAAG GGCGCTCCCC CGGCGGGCCC TGAAGGTGCA
GGCGAGCTCG GCGACGGCAC GCACGGCGAC CACGGCCCGG GCGGCGCACC CGGTGACGCG
CCGGATACGG GTGCTGATGG TGCTGATGGT GTTTTGTCGC CGACGGCTGC GGCTTGGGAC
GCCGGGCTGA TCACCCGCGA GCACGCACTG ATCATCACCG GCGCTCTGGA CGACCTGCCC
GAGCACCTCA CCGACGGGCA GCGCCTGACC GTCGAAGAAG GGCTGGTCGC CAAGGCCCAA
CAGGTCAACC CCGCCACCCT GCGCAAGGCA GCCAAACGAG CCCTGGAAGC ACTCGACCTG
CCCGACGCCG AGGTCGACGC CCACCACGAC CAGCTCCTGC ACAACCAAGA ACGCGCAGCG
TGGGACGCCG CGAGCTTCTG GATGCGCGAC AACCACGACG GGACCTGGTT CGGACAGTTC
ACCCTGCCCG AACTCCAAGC CCACATGCTC AAGAAAGCCC TCGAAGCCCT CACCAACCCC
CGCCGCCGCA CGAACCACCC CAACAACCCC AAGGCGGGCA ATGGCGCAGC CGAAGGCGGC
GTCGCGCCGA CGGGAGCTGG CATGGCCGCA CCGACGGGTG ATGGTCGGTT CGACCGGGCA
GTGCGTGACC AGCAGCGCGG ACAAGCACTG GCCGAGCTCA TCGACCACCT GCCCACCGAC
CAGCTCGGCA CCAAGATCAA CGCCACCGTG CTGATCCGCA CCGACCTGGC CACCCTCCGC
GGCGAAACAG ACCGGGCCGG GATCACCGAC ACCGGCACCG AGATCTCCAC CAGCGAACTA
CGCCGCCTGG CCAGCAACGC CGGACTCATC CCCATCGTCA TGAACGGCAC CACCATCCCC
CTGGACCTCG GAAGGCAACG CCGGTTCTTC ACAGACTCCC AACGAGCAGC CCTGGCACTG
GTCTACGACA CCTGCGCCGC CGGCGACTGC GACCGACCCT TCGCCTGGTG CGAAATCCAC
CACGCCCAAC CCTGGAAACC CGTCCACGGA CCCGACGGAC AACTCCTCCA CCCCGGCGCA
GGCAAAACCG ACCTCACCAA CGCCATCCCC CTGTGCGGCA AACACCACCG CCAACTCACC
GACCACCGCC TGACCCACAC CATCCACCGC GACCACCACG GCAAAGCCGC CATCACCTAC
ACCTGGCGCA AACCCGGAGA CCCCTGGAAC ACCAGCGACC CCTGGAACCA GGCCACACCA
CCCACCGCAC CCCCCCACCA ACCCCCGCAA GGAACCAGTG ACCCCCCGCC CCGGGCCACC
ACCCCACCGA CCCCCGGCAC CCGCGCCTGG CCGACCCCAG ACACCCGTCC ATGA
 
Protein sequence
MAMTTTASTQ STTDDAVAVA REAFAAVHTA ADHALAAVAA LGSTDLPLDV ATLEWLVQEA 
QRVVNRHDRI RIRALDVVRR TREAGGSHHD NDAQFTAGRT HTDPRGAARD THLAKALGNQ
PPTPPPNGPK GAPPAGPEGA GELGDGTHGD HGPGGAPGDA PDTGADGADG VLSPTAAAWD
AGLITREHAL IITGALDDLP EHLTDGQRLT VEEGLVAKAQ QVNPATLRKA AKRALEALDL
PDAEVDAHHD QLLHNQERAA WDAASFWMRD NHDGTWFGQF TLPELQAHML KKALEALTNP
RRRTNHPNNP KAGNGAAEGG VAPTGAGMAA PTGDGRFDRA VRDQQRGQAL AELIDHLPTD
QLGTKINATV LIRTDLATLR GETDRAGITD TGTEISTSEL RRLASNAGLI PIVMNGTTIP
LDLGRQRRFF TDSQRAALAL VYDTCAAGDC DRPFAWCEIH HAQPWKPVHG PDGQLLHPGA
GKTDLTNAIP LCGKHHRQLT DHRLTHTIHR DHHGKAAITY TWRKPGDPWN TSDPWNQATP
PTAPPHQPPQ GTSDPPPRAT TPPTPGTRAW PTPDTRP