Gene Ksed_17960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17960 
Symbol 
ID8373301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1869037 
End bp1870305 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID644992053 
Productintegrase family protein 
Protein accessionYP_003149565 
Protein GI256825605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.259892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.82846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTTGG CCTGCCGGCT GGGAATCGCT CCCTCGACCG TCCACCGCAT CCTGCGCAAC 
GCCCGCCTGA ACCGGCTCTC GCATGTCGAC CGCGCGACCG GAGAGCCGAT TCGGCGCTAC
GAGCACGACC ACCCAGGCGC GATGCTTCAT GTCGATGTGA AGAAGCTCGG AAACATCCCC
GACGGCGGAG GCTGGCGCTA CGTTGGCCGC CAGCAGGGCG AGAAGATCCG CGCCTCGACA
CCGGGCAAGC CCAGGAACAA GTACAGCGAC CCGTTGATGG GCAAGGCCTA CGTCCACACC
GTCATTGACG ATCACACCCG CGTGGCGTAT GCCGAGATCC ACGATGATGA GACCGCTCCG
ACCGCCACCG CTGTGCTGGT CCGAGCCGTT GAGTGGTTCA ACCAGCGGGG CGTCACCGTC
GAACGAGTCC TGTCAGACAA CGGCGGTGCC TACCGATCAC ATCTGTGGCG CGAGACCTGC
GCCGAACTCG GCATCACGCA CAAGCGCACT CGGCCGTATC GTCCGCAGAC CAACGGGAAG
GTCGAGCGTT TCCATCGCAC CATGGCCGAC GGGTGGGCCT ACGCCCGCTG CTACACATCC
GAAGCCGAAC GACGCGGCGA ACTCGACGGA TGGCTGCACT ACTACAACCG CCACCGACCC
CACACAGCCT GCGGGAACAA GCCGCCCTTC TCACGATTGA CCAACGTCAC CGGTCAGTAC
AGCTATGTCG GCCGCCGCCA AGGCGAGAAG AACCGCTCCG CTACCCCGGG CAAGCCGCGG
AGTAAGTGGC ACAACCCCAA GCTCGAGTAC GCGTTCGTAC ACACCGTCAT CGACCACTCC
CGCCTCGCTT ACAGCGAGGT TCACGACGAC GAAACCGCGA TCACCGCCGT CGCCGTCCTG
CACCGGGCGG TCGACTGGTT CGTCGACCGC AGCGTCATCA TGGAACGCGT CCTGTCGGAC
AACGGCGCCG CGTATCGGTC CTTCCTGTGG CGTGACGCCT GCGAGGCACT TCGGGTCACC
CCGAAACGGA CTCGCCCGTA TCGGCCTCAG ACCAATGGGA AAGTCGAGAG GCTTCATCGA
ACCATGGCCG ACGGTTGGGC CTACTCACGT TGCTACACCT CCGAGGGTGA TCGTCGTGCT
TCCCTCGACG GATGGCTGCA CCAGTACAAC CAGCACCGGC CACACAGCGC CTGCGATAAC
CAGCCGCCGT TCTCACGTTT GATCAACGTC CCCGATCAGT ACAGCAAGGG CACCGTCGCA
GCGTCCTGA
 
Protein sequence
MQLACRLGIA PSTVHRILRN ARLNRLSHVD RATGEPIRRY EHDHPGAMLH VDVKKLGNIP 
DGGGWRYVGR QQGEKIRAST PGKPRNKYSD PLMGKAYVHT VIDDHTRVAY AEIHDDETAP
TATAVLVRAV EWFNQRGVTV ERVLSDNGGA YRSHLWRETC AELGITHKRT RPYRPQTNGK
VERFHRTMAD GWAYARCYTS EAERRGELDG WLHYYNRHRP HTACGNKPPF SRLTNVTGQY
SYVGRRQGEK NRSATPGKPR SKWHNPKLEY AFVHTVIDHS RLAYSEVHDD ETAITAVAVL
HRAVDWFVDR SVIMERVLSD NGAAYRSFLW RDACEALRVT PKRTRPYRPQ TNGKVERLHR
TMADGWAYSR CYTSEGDRRA SLDGWLHQYN QHRPHSACDN QPPFSRLINV PDQYSKGTVA
AS