Gene Ksed_16470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16470 
Symbol 
ID8373153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1698977 
End bp1699600 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content74% 
IMG OID644991915 
Productlipoprotein signal peptidase 
Protein accessionYP_003149427 
Protein GI256825467 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.384825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0671311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAG CATCAGGAGC GGCGCTGAAC GCGCCCCACA CCCCGTCCTC CGACCGTCCG 
ACCCGCCGCC GGGGCCACCT GCCCCTGGTG GCGGGTCTCG CCACCGTGTG GGTGGTGGTC
GACCAGGTCA CCAAGGAATG GGCCCTGGCC CGTCTCGACC GGGGGGAGGC CGTCCCCGTC
TTGGGTGAGC TGCTGCAGCT CCGGCTGGTG TTCAACCCCG GCGCCGCCTT CAGCCTGGGC
ACCTCGGCCA CGCCGGTGTT CACCGTGCTG GCCACGGTGG TCTCGCTGGC GATCCTCTGG
TTCAGCCGCC AGGTCATCAG CCCCGCGTGG GGCGTGGCCC TGGGGCTGAT CGCCGGCGGC
GCGGTCGGCA ACCTGGTTGA CCGGCTCGTC CGGGCGCCGG GCTTCGCGCG GGGGCACGTG
GTGGACTTCC TGGCCCTGCC GAACTGGCCG GTGTTCAACG TGGCCGACAT CGGTGTGACC
TGCGGGGCTG CCCTGGTGGT CCTGCTGGCC CTGCGCGGCA TCGAACCCAC CGATCCCGAC
GCGGCGGACG AGGCCGTTGC GGCCCCCGCA GCCCCCGCCG ATGCCCCCCA CGCGGCCCCC
GACAACCCCC AGGAGCGCGC ATGA
 
Protein sequence
MQAASGAALN APHTPSSDRP TRRRGHLPLV AGLATVWVVV DQVTKEWALA RLDRGEAVPV 
LGELLQLRLV FNPGAAFSLG TSATPVFTVL ATVVSLAILW FSRQVISPAW GVALGLIAGG
AVGNLVDRLV RAPGFARGHV VDFLALPNWP VFNVADIGVT CGAALVVLLA LRGIEPTDPD
AADEAVAAPA APADAPHAAP DNPQERA