Gene Ksed_16190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16190 
Symbol 
ID8373125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1665148 
End bp1665939 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID644991887 
Productcytochrome c, mono- and diheme variants family 
Protein accessionYP_003149399 
Protein GI256825439 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.188569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC TCCTCGAATA CCGGCGCCAC CCCGCCGCGA TCTTCGTGTT GCTGCTGGCA 
GCCCTGGCCG TCATGGGCGG TCTCTACATG GCCCTCAAGC CCTCGGAGGT GCGCGCCGAG
ACGGCCGCCA TGTCCGCTGA GGACGTCCAG GAGGGCAACA AGCTCTTCCA GGCCAACTGC
GCCACCTGCC ACGGCGCGAA CGGCGAGGGC ATCACCGATG CCGGGCCGTC GCTGGTGGGC
GTCGGCGCTG CCGCCGTCGA CTTCCAGGTC GCCACCGGCC GCATGCCGCT GGCCGCCCCC
GGTGTGCAGG CCATGCGCAA GGAGCCGCAG TTCGACCAGG AGCAGATTGA CCAGATGGCC
GCCTTCGTGG CCAGCCTGGG TGACGGCCCG GCCGTCCCGG AGGAGCAGTA CACCGACCTC
GAGGGCGCTG ATGCCGCCCA CGGTGGTGAG CTCTTCCGCG TCAACTGCGC CATGTGCCAC
AACTTCAACG GCTCCGGTGG CGCCCTGACG CGCGGCAAGT ACGCCCCCTC CCTGGAGGGC
GTCAGCCCCA AGCACGTCTA TCAGGCCATG GACACCGGCC CCCAGAACAT GCCGGTCTTC
AGTGACTCCA ACCTGTCCCC CCAGGACAAG GAGGACATCT CGGCCTACCT GGACGAGATG
CACAACGCGC CCAACCAGGG TGGTAACGAC CTCGGCAACC TCGGCCCGGT GGCCGACGGT
GTCTTCATCT GGACCCTGGG CATCGGACTC TTCCTCGGTG CTGCCTTCTG GCTGACGAGG
AAGTCCAGCT GA
 
Protein sequence
MNSLLEYRRH PAAIFVLLLA ALAVMGGLYM ALKPSEVRAE TAAMSAEDVQ EGNKLFQANC 
ATCHGANGEG ITDAGPSLVG VGAAAVDFQV ATGRMPLAAP GVQAMRKEPQ FDQEQIDQMA
AFVASLGDGP AVPEEQYTDL EGADAAHGGE LFRVNCAMCH NFNGSGGALT RGKYAPSLEG
VSPKHVYQAM DTGPQNMPVF SDSNLSPQDK EDISAYLDEM HNAPNQGGND LGNLGPVADG
VFIWTLGIGL FLGAAFWLTR KSS