Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_15600 |
Symbol | ligC |
ID | 8373066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1597255 |
End bp | 1598355 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644991828 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_003149340 |
Protein GI | 256825380 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.138561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAG CCGATGCCGG GACGCTCCCG GGCGTGATGC TCGCGAAGGC CGCCACGAGC GTGCCCTCCC CCGACGCGCT CCCGGGCGGC TGCAGCTACG AGCCCAAGTG GGACGGTTTC CGCATCCTCG TCGTACGGGG CGCCCGGGCC GACGCCGCGA CGGCCGCGGG CGAGGGGGAC GACGCGGTCG ACCTCATCGG GCGCAGTGGG AAGTCGCTGA CGCGGTACTT CCCGGAGGTG GTCGAGAAGG TGCGCGCCAT CCCGGCGCCG GCGATCGTCG ACGGCGAGCT GGTGGTGCGC TCCGGCGAGC CCGGGACCGA GCGGCTGGAC TGGGACGCAC TCTCGCAGCG CATCCACCCG GCGGCCTCCC GCATCGAGAA GCTGGCGGTC GAGACGCCCG GGGAGGTGAT CTGCTTCGAC CTGCTCGCCG ACGACTCCGG GGAGCTGCTC GAGGAGCCCT TCGCGACCCG CCGGGAGAGG TTGGCGGCGT TGGTGGGTGG GCTTCCCGCA TCGAGGGGGG TGCACCTGAC GCGCGCGACG ACCGATGCGG ACGAGGCCGC GCGGTGGTTC ACCCAGTTCG AGGGGGCGGG GCTGGACGGC ATCGTGGCGA AGGGGCTGGA CAGTCCGTAC GAGCCCGGGA AGCGCACGAT GCTGAAGGTC AAGCACAAGC GCACGGCCGA TGCGGTGCTG GTGGGCTACC GGGTGCACAA GAGCGGCGCG GGCGTGGGGT CGTTGCTGCT GGGCCTCCAT TCCGGTGGGG AACTGGTGCC TGTGGGCGGC ATCTCGGCGT TCACCGCGGC CCGGCGGCTG GAGCTGGCCG AGGAGCTGGA GCCTCTGGTG GTGCGGACGG CGGACGGCTC GGTGGCGGCG GCCGAGCGGG AACGCAACCG GTTCACCTCG GCCAAGGACA CCAGCTACGT GCCGCTGCGG CCCGAGCGGG TGGTGGAGGT GGCCTTCGAC CAGCTGGAGG GGCACCGGTT CCGGCACGCG GTGCGGTTCG TCCGCTGGCG GGAGGACAAG GGGCCCACCG AGTGCACCCT GGAGCAGGTT GACGTGGCCT CCGGATACGA TCTGAACGCC GTGCTGGCCG CGGATTCCTG A
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Protein sequence | MTTADAGTLP GVMLAKAATS VPSPDALPGG CSYEPKWDGF RILVVRGARA DAATAAGEGD DAVDLIGRSG KSLTRYFPEV VEKVRAIPAP AIVDGELVVR SGEPGTERLD WDALSQRIHP AASRIEKLAV ETPGEVICFD LLADDSGELL EEPFATRRER LAALVGGLPA SRGVHLTRAT TDADEAARWF TQFEGAGLDG IVAKGLDSPY EPGKRTMLKV KHKRTADAVL VGYRVHKSGA GVGSLLLGLH SGGELVPVGG ISAFTAARRL ELAEELEPLV VRTADGSVAA AERERNRFTS AKDTSYVPLR PERVVEVAFD QLEGHRFRHA VRFVRWREDK GPTECTLEQV DVASGYDLNA VLAADS
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