Gene Ksed_13500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13500 
Symbol 
ID8372858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1398764 
End bp1399477 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID644991625 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003149144 
Protein GI256825184 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CACGACGCGT CCTGGTCACT GGCGGCAACC GAGGCATCGG CGAGGCCATC 
GCCCGCCACC TCACCGAGGA GGGACACGAG GTGGTGGTCA CCTCCCGCAG CGGCGACGCC
CCCGAGGACC TGCGCGCCGT GGCCTGCGAC GTCACCGACA CCGCCTCGGT GGACCAGGCC
CTGAAGGACG CCGAGGAGGT CCTGGGCGGC ACCGTCGAGG TCCTGGTGGC CAACGCCGGC
ATCACCGCCG ACGGGCTCTC CATGCGCATG AAGGACGACG ACTTCGCCTC CGTCCTGGAC
ACCAACCTGC ACGGCGCCTT CCGCTGTGTG CGGGCCGCCC AGAAGGGCAT GATCCGGGGC
AAGTTCGGCC GCATCGTGCT CGTCGGGTCG GTGGTCGGCC TCTACGGCTC GCCCGGTCAG
GCCAACTACG CGGCCTCGAA GGCGGGCCTG GTCGGCCTGG CCCGGGCCCT GACCCGCGAG
CTCGGCAGCC GTGGCATCAC CACCAACGTC GTCGCCCCCG GTTTCGTGCA GACCGACATG
ACCGACGCCC TGCCCGCCGA GCGGCAGGAG GCCTACCTCG CCTCCATCCC GGCGGGCCGC
TTCGCACAGG CCGATGAGGT GGCGCACGCC GTGGCCTACC TCGCCTCCGA CGGCGCCGGC
TACGTCTCCG GCGCGGTCCT GCCCGTCGAC GGCGGGCTCG GCATGGGGCA CTGA
 
Protein sequence
MSTTRRVLVT GGNRGIGEAI ARHLTEEGHE VVVTSRSGDA PEDLRAVACD VTDTASVDQA 
LKDAEEVLGG TVEVLVANAG ITADGLSMRM KDDDFASVLD TNLHGAFRCV RAAQKGMIRG
KFGRIVLVGS VVGLYGSPGQ ANYAASKAGL VGLARALTRE LGSRGITTNV VAPGFVQTDM
TDALPAERQE AYLASIPAGR FAQADEVAHA VAYLASDGAG YVSGAVLPVD GGLGMGH