Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_13070 |
Symbol | |
ID | 8372815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1355761 |
End bp | 1357716 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644991584 |
Product | Excinuclease ABC subunit C |
Protein accession | YP_003149103 |
Protein GI | 256825143 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGATC CCGCCAGCTA CCGCCCCCGC CCCGGGGAGA TCCCGACCTC TCCGGGGGTG TACCGCTTCC GCGACACCCA CGGCCGCGTC ATCTACGTGG GCAAGGCCAA GTCGCTGCGC TCCCGGCTGA GCTCGTACTT CCAGAACCCC GCCCAGCTGC ACCCCCGCAC CCGGCAGATG GTGAACACCG GGGCGTCGGT CGAGTGGACC GTCGTCAACA CCGAGGTCGA GGCGCTGCAG CTCGAGTACG CCTGGATCAA GGAGTTCGAC CCCCGGTTCA ACGTCAAGTA CCGGGACGAC AAGTCCTACC CCTACCTCGC CGTCACCTGG GCCGAGGAGG TCCCGCGGGC GATGGTGATG CGGGGGGCCA AGCGCAAGGG CAACCGGTAC TACGGACCCT TCGCCCAGGC CTGGGCCATC CGCGAGACGC TCGACCTGGC CACGCGCGTG TTCCCCATCC GCACCTGCAG CAAGGGGGTC TACAACCGTG CTGCGGCGGC CGGGCGGCCG TGCCTGCTGG GGTACATCGA CAAGTGCTCG GCGCCCTGCG TCGGCGCGGT CACCCCCGAG CAGCACCGGG AGATCGTGAA CGACTTCTGC CGCTTCATGT CCGGCGACAC GGCGGGTCTG CTGCGCGACC TGCGGGGCCG TATGGAGCAG GCCGCGGCGG ACCTGGACTT CGAGAACGCC GCCCGCCTGC GCGACGACCT GGGCGCGTTG GAGAAGGTGC TGGAGAAGTC CGCCGTGGTG TTCAACGAGA CGGTGGACGC CGATCTCTTC GGCATCGCGG ACGACGAGCT GGAGGCCGCG GTGCAGGTCT TCCACGTGCG GGGTGGGCGC ATCCGTGGCC AGCGCGGTTG GGTGGTCGAC AAGGAGGACC ACCCCACCGC CGAGGCCATC GAGCACCTCC TGCGCCAGTT CTACGGCACC GGCGACGAGG AGATCCCCCG CGAGGTCCTG GTGTCGACCG ACCCCACCGA CCACGAGGTC CTCACCGAGT GGCTCACCTC GATGCGGGGC TCACAGGTCA CCATCCGCAC GCCGGAGCGC GGCGACAAGG CCACCCTGCT GCGCACCGTC ATCCGCAACG CCGAGGAGTC CCTGGCCCGG CACAAGATGA GCCGCGCCGG GGACCTGACG GCGCGATCGG CCGCGCTGGC AGAGCTCGAG GAGGCGCTCG GCCTCGCCGA GGCGCCCCTG CGGATCGAGT GCTACGACAT CTCCCACACG CAGGGGGAGA ACTCCGTCGG CTCGATGGTG GTCTTCGAGG ACGGACTGCC TCGCAAGTCC GAGTACCGGC GTTTCATCGT GCGCGAGCCC GCCGACGACA CCCGCGCGAT GGCGGAGGTC CTCACCCGCC GCTTCCGCCA CGGCACCAGC TCGCCGGAGG GGGACGACCT GTCCGACGGG CCGCGGCAGG GTGCGTCCGA CGAGGCCGGC GACTCGACCT CACCGCGGCC CGCCAAGCGC TTCGCCTACC CGCCGCAGCT GATCGTGGTG GACGGTGGCC TGCCGCAGGT GAACTCCGCG CGGGCGGCCC TCGATGCCGC GGGCGCCGAG GACATCGCCG TGGTGGGTCT GGCCAAGCGG CTGGAGGAGG TGTGGGTCCC CGGGGACGAC TTCCCGTTGG TGCTGCCCCG CAGCAGCGAC GCCCTGTTCC TGCTGCAGCG CCTGCGCGAC GAGGCCCACC GGTTCGCCAT CACCTTCCAC CGGCAACGGC GGTCCAAGGC CATGACCGCC AGCGAGCTCG ACACCGTCCC CGGCCTGGGC CCGGCCCGCC GCCGGGCCCT GCTGGAGGCC TTCGGCACGG TCCGCGCCAT CCGCGCGGCC ACCCCCGAGG AGCTCGCGGC GGTGCCGGGC ATCGGGCCGG GTCTGGCCCG GACCGTGCAG GAGCACCTGT CCGGTTCGAC GGCCGCGCCC GCGGTGAACG TCACCACGGG CGAGGTGCTG GACTGA
|
Protein sequence | MADPASYRPR PGEIPTSPGV YRFRDTHGRV IYVGKAKSLR SRLSSYFQNP AQLHPRTRQM VNTGASVEWT VVNTEVEALQ LEYAWIKEFD PRFNVKYRDD KSYPYLAVTW AEEVPRAMVM RGAKRKGNRY YGPFAQAWAI RETLDLATRV FPIRTCSKGV YNRAAAAGRP CLLGYIDKCS APCVGAVTPE QHREIVNDFC RFMSGDTAGL LRDLRGRMEQ AAADLDFENA ARLRDDLGAL EKVLEKSAVV FNETVDADLF GIADDELEAA VQVFHVRGGR IRGQRGWVVD KEDHPTAEAI EHLLRQFYGT GDEEIPREVL VSTDPTDHEV LTEWLTSMRG SQVTIRTPER GDKATLLRTV IRNAEESLAR HKMSRAGDLT ARSAALAELE EALGLAEAPL RIECYDISHT QGENSVGSMV VFEDGLPRKS EYRRFIVREP ADDTRAMAEV LTRRFRHGTS SPEGDDLSDG PRQGASDEAG DSTSPRPAKR FAYPPQLIVV DGGLPQVNSA RAALDAAGAE DIAVVGLAKR LEEVWVPGDD FPLVLPRSSD ALFLLQRLRD EAHRFAITFH RQRRSKAMTA SELDTVPGLG PARRRALLEA FGTVRAIRAA TPEELAAVPG IGPGLARTVQ EHLSGSTAAP AVNVTTGEVL D
|
| |