| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12570 |
|---|
| Symbol | |
|---|
| ID | 8372765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1295258 |
|---|
| End bp | 1296529 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644991534 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003149054 |
|---|
| Protein GI | 256825094 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.302511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.155474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCCA GCGCGTTGCG TCCTGAGGAC GCCCGGGACC CGCAGGAGGT CCGAACCACC
GAGACCGCAG GGCAGCCCGC CGGAGCGACG GCCGCCGACC GCCCGGACGC GGCCACCCTG
CAAGCGACCA CCGGCTCGGC CACCGACGCG GACTGGAACC GTGACCACTC GGCGGAGAAC
CCGAACAACC CCGGGGTCCC GGCCCGTGCC GTGGAGACCA ATGTCGACGA GGTCGTCGCC
ACGGGTGTCC GCAAGGACCG CCTGGGTGAG ACCCCCGTCA TCAGTGGGCG TGGGCTGAAG
CGGCACTACC CGCTGACCAA GGGTGTCTTC AAGCGCGTGT ACGGCCACGT CCGCGCCGTC
GACGGTGTGG ACTTCGACCT GTACCGCGGC GAGACCCTGG GCGTGGTGGG AGAGTCCGGC
TGTGGCAAGT CCACGCTCGG ACGCCTCATC ATGTCCCTGG AGAAGCCCAC CGAGGGTGAG
CTCTTCTACA AGGGCCAGGA CATCTCGTCC ATGAACTCCC GCGAGTTCCG CGAGATGCGG
CGCAACGTCC AGATGGTGCT GCAAGACCCG TATACCTCCC TGGACCCGCG CATGACGGTG
GGCGACATCA TCGCCGAGCC GTTCCGCATC CACACCGACG TGCTCCCCCG CGGCAAGCGG
ACGGCACGCG TTAAGGAGCT CATCGACCTG GTGGGCCTCA ACCCGGAGCA CATCAACCGC
TACCCGCACC AGTTCTCCGG TGGTCAGCGT CAGCGCATCG GCATCGCCCG CGGCCTGGCC
CTGAACCCCG AGGTCATCGT CTGCGACGAG CCGGTCTCCG CGCTCGACGT GTCGGTGCAG
GCGCAGGTGG TGAACCTGAT GGAGGAGCTG CAGGACGAGC TGGGGCTCTC CTACATCTTC
ATCGCCCACG ACCTCTCGGT GGTGCGCCAC ATCTCCGACC GCGTAGCCGT GATGTACCTG
GGCCGCATGG TGGAGCTCGG CGACGAGGAC CAGATCTACG GCCGCCCGGT GCACCCGTAC
ACCCAGGCGC TGCTCTCCGC GGTGCCGGTG CCGGACCCCG AGCTGCGTGG CAAGCGCAAC
CAGATCCGCC TCGAGGGCGA CGTGCCCTCC CCGGCCAACC CGCCGTCGGG CTGCCGCTTC
CGCACCCGCT GCTGGAAGGC CGTGGAGCTG TGTGCCACGA GCGACCCGCA GCTGGAGATC
CGCGAGGGCA CCGACCACCC GAGCCGGTGC ATCTTCTCCG AGGAGCGCCA CGTGGTCGAG
GCGGTCCGCT GA
|
|---|
| Protein sequence | MGASALRPED ARDPQEVRTT ETAGQPAGAT AADRPDAATL QATTGSATDA DWNRDHSAEN
PNNPGVPARA VETNVDEVVA TGVRKDRLGE TPVISGRGLK RHYPLTKGVF KRVYGHVRAV
DGVDFDLYRG ETLGVVGESG CGKSTLGRLI MSLEKPTEGE LFYKGQDISS MNSREFREMR
RNVQMVLQDP YTSLDPRMTV GDIIAEPFRI HTDVLPRGKR TARVKELIDL VGLNPEHINR
YPHQFSGGQR QRIGIARGLA LNPEVIVCDE PVSALDVSVQ AQVVNLMEEL QDELGLSYIF
IAHDLSVVRH ISDRVAVMYL GRMVELGDED QIYGRPVHPY TQALLSAVPV PDPELRGKRN
QIRLEGDVPS PANPPSGCRF RTRCWKAVEL CATSDPQLEI REGTDHPSRC IFSEERHVVE
AVR
|
|---|
| |