Gene Ksed_11540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11540 
Symbol 
ID8372662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1184712 
End bp1185020 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content67% 
IMG OID644991432 
ProductLSU ribosomal protein L21P 
Protein accessionYP_003148959 
Protein GI256824999 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.536091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.231527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGCGA TCGTCCGCGC CGGTGGCCGC CAGGAGAAGG TTTCCGTCGG TGACGTGCTC 
ACCGTCGACA AGGTGGCCGG TGAGGCCGGC GAGAGCATTG ACCTGCAGCC GCTCCTGCTC
GTCGACGGCT CCACCGTGAC CGCCGCCTCC GACAAGCTCG CCGCGGCGAG CGTCACGGCG
GAGATCCTGG GCGCCACCAA GGGCCCCAAG ATCACCATCC AGCACTACAA GAACAAGACC
GGTTACAAGC GGCGCCAGGG TCACCGTCAG CCGCTCACCG AGGTCAAGAT CACGGCGATC
AACGCCTGA
 
Protein sequence
MYAIVRAGGR QEKVSVGDVL TVDKVAGEAG ESIDLQPLLL VDGSTVTAAS DKLAAASVTA 
EILGATKGPK ITIQHYKNKT GYKRRQGHRQ PLTEVKITAI NA