Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_11170 |
Symbol | |
ID | 8372625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1141014 |
End bp | 1142024 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644991395 |
Product | site-specific recombinase XerD |
Protein accession | YP_003148922 |
Protein GI | 256824962 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.0225756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA CGGGTCTGTT GCGGGAGGTC GAGGGCTTTG CCGACCACCT GCTCCTCGAG CGTGGGAGGT CGCCCCACAC CGTGCGGGCG TACACCGCGG ACCTGACCGC TCTCGCCGAG CACCTGGAGG CAGCCGGGGC CACCGAGTGG CGCCAGGTGA CCCTGAGCGA CCTGCGCTCC TTCGCCGCCC GTCGTGCGGC CGCCGGCCTG GCGCGGTCGA CCCTGGCGCG GGGGACGGCC TCCCAGCGCA CCTTCTTCGG GTGGATGGTG GCCACCGAAC GGCTGGTGGT CGACCCCTCC GCCCGTCTGG TGTCGCCTCG CGTCGAGAAG CGCCTGCCCG CCGTACTGCG GGCGGAACAG GCGGCCCAGC TGGTCGAGGG TGGGGGGACC CGACCCGAGC CGAGGGCGAC GGGTGGTGCA GGGGACCCCG GGGGCGACAC CCAGACCGAC ACCGACACCG ACACCGACGC GGCACCGGGA ACCGAGGCCG ACCCGGTCTC CCTCGCCACC GACCTGCGCG ACCGGGCCGT GCTCGAGCTG CTCTACGCCA CCGGCATCCG GGTGGGGGAG CTGGTGTCCC TGGACACGGG CGCCGTCTCC CTGCAGGACC ACACGGTGCG CGTCTGGGGC AAGGGCAGCA AGGAACGGGT GGTGCCCTTC GGCGTGCCGG CGCTCCGTGC CCTGGAGGAG TGGGTGCACC AGGGGCGCCC GGAGCTGCTG GGCGCTCGCA GCGGCGAGGC CCTGTTCCTG GGGGTGCGGG GTGGACGCAT CGACCCCCGG GAGGTGCGGC GGGTGGTGCA CCGCGCGGCC CAGCGGGTGG AGGGAGCAGC CGACATCGGG CCGCACGGCC TGCGGCACTC CGCGGCGACC CACATGGTCG ACGCCGGGGC CGACATCCGC TCGGTGCAGG AGCTGCTGGG CCACGCCAGC CTGGCCACCA CGCAGGTGTA CACGCACGTC TCGGTCGAGC GGCTCCGCGA GGCCTTCGAC CGGTCACACC CGCGGGCCTG A
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Protein sequence | MSATGLLREV EGFADHLLLE RGRSPHTVRA YTADLTALAE HLEAAGATEW RQVTLSDLRS FAARRAAAGL ARSTLARGTA SQRTFFGWMV ATERLVVDPS ARLVSPRVEK RLPAVLRAEQ AAQLVEGGGT RPEPRATGGA GDPGGDTQTD TDTDTDAAPG TEADPVSLAT DLRDRAVLEL LYATGIRVGE LVSLDTGAVS LQDHTVRVWG KGSKERVVPF GVPALRALEE WVHQGRPELL GARSGEALFL GVRGGRIDPR EVRRVVHRAA QRVEGAADIG PHGLRHSAAT HMVDAGADIR SVQELLGHAS LATTQVYTHV SVERLREAFD RSHPRA
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