Gene Ksed_11040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11040 
Symbol 
ID8372612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1131023 
End bp1131559 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID644991382 
ProductSSU ribosomal protein S16P 
Protein accessionYP_003148909 
Protein GI256824949 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0237253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.066804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGTCA AGATCCGACT GAAGCGCATG GGCAAGATCC GTGCACCGTT CTACCGCGTC 
GTCGTCATGG ACTCGCGCCA GAAGCGCGAT GGCCGTGCGA TCGAGGAGAT CGGTCTGTAC
CACCCGACCG AGGAGCCCTC GCGCATCGAG ATCAACTCCG AGCGTGCGCA GTACTGGCTC
GGTGTCGGCG CGCAGCCGAC CGAGCAGGTC GCCGCGCTGC TCAAGGTGAC CGGTGACTGG
GCGACCTTCA AGGGCGAGAC CGGTGGTTCC ACCGTGAAGC TGGCCGAGGC CAAGCCGTCG
AAGCAGGAGC TGTTCGAGCA GGCTCTGAAG GACGCGGACA ACGCCCCGGC CGAGGCCCCG
ACCCCCAAGA AGAAGAAGTC CAAGGCGGAC GAGGTCGCCG AGCAGGCCGA GCCCACCACC
AAGACCACGG CGGACAAGGC CGACGAGGCC CCGAAGGCCG CCGAGGCCGA GTCCGAGGCA
GCTGCCGAGG ACGCCAAGTC CGACGCCGAG AACACCCCCT CCACCCAGGA GGGTTGA
 
Protein sequence
MAVKIRLKRM GKIRAPFYRV VVMDSRQKRD GRAIEEIGLY HPTEEPSRIE INSERAQYWL 
GVGAQPTEQV AALLKVTGDW ATFKGETGGS TVKLAEAKPS KQELFEQALK DADNAPAEAP
TPKKKKSKAD EVAEQAEPTT KTTADKADEA PKAAEAESEA AAEDAKSDAE NTPSTQEG