Gene Ksed_10060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_10060 
Symbol 
ID8372515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1034293 
End bp1035492 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID644991287 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_003148816 
Protein GI256824856 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.251094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.644816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCGT TCCAGGACGA CCTGAACTCC GAGCTCACCG AGATCAAGGA CGCCGGACTG 
TGGAAGGCCG AGCGCGAGCT CACCTCCCCG CAGTCGGCCC ACGTGACCAC CAAGAAGGCC
GAGGCGCTGA ACTTCTGCGC CAACAACTAC CTCGGCCTGG CCGACCACCC GGAGGTGGTC
GCCGCCGGCA AGGAGGCCCT CGACCAGTGG GGCTTCGGCA TGGCCTCGGT CCGCTTCATC
TGCGGCACCC AGACCCTTCA CACCGAGCTC GAGCAGCGCA TCGCCGAGTA CGTCGGCTGC
GAGGACGCGA TCCTCTACGC CTCCTGCTTC GACGCCAACG GCGGCTTCTT CGAGGTCCTC
TGCGGCAAGG AGGACGCGAT CGTCTCCGAC GCCCTCAACC ACGCCAGCAT CATCGACGGC
GTGCGCCTCT CCAAGGCGAT GCGCTTCCGC TACGCCAACC GCGACATGGA CGACCTGCGC
GCCCAGCTGC AGGCCGCCCA GGAGGCCGGT GCCCGCCGCA CCGTCGTCGT CACCGACGGC
GTGTTCTCCA TGGACGGCTA CTACGCCCCG CTGCCGGAGA TCTGCGACTT GGCCGAGGAG
TTCGGCGCCC TGGTCGTGGT CGACGACTCG CACGCCACCG GCTTCACCGG TGAGAAGGGC
CGCGGCACCC CGGAGAAGTT CGACGTCATC GACCGCGTGG ACGTCGTGAC CGGCACCTTC
GGCAAGGCCC TCGGCGGCGC CTCCGGTGGC TTCGTCGCCG GCCCGAAGGA GATCGTGGCC
CTGCTCAAGC AGCGCTCCCG CCCGTACCTG TTCAGCAACG CCGTGGCCCC CAGCACCGCC
GCCGGCTCGC TGAAGGCCCT GGAGCTCGTG CAGCAGTCCG ACGACCTGCG CCGCCAGCTC
CAGACCAACG CGCAGCTCTT CCGGGAGCTC ATGACCGAGG CCGGCTTCGA GCTGCTCGAG
GGCAGTCACC CGATCATCCC GGTGATGTTC CCCGGCGAGG ACGGCGCCCG CCAGGCCGGC
CTCATCGCCG AGGAGCTCCT CGAGCGCGGC GTGTACGTCA CGCCCTTCTC CTACCCGGTG
GTGCCCAAGG GCGAGGCGCG CATCCGCGTC CAGCTCTCGG CCGCCCACTC CGAGGAGGAC
GTCCGCACCT GCGTGCAGGC CTTCGCCGAC GCCCGCGACG CCGTCGCCGC CCGGGGCTGA
 
Protein sequence
MYAFQDDLNS ELTEIKDAGL WKAERELTSP QSAHVTTKKA EALNFCANNY LGLADHPEVV 
AAGKEALDQW GFGMASVRFI CGTQTLHTEL EQRIAEYVGC EDAILYASCF DANGGFFEVL
CGKEDAIVSD ALNHASIIDG VRLSKAMRFR YANRDMDDLR AQLQAAQEAG ARRTVVVTDG
VFSMDGYYAP LPEICDLAEE FGALVVVDDS HATGFTGEKG RGTPEKFDVI DRVDVVTGTF
GKALGGASGG FVAGPKEIVA LLKQRSRPYL FSNAVAPSTA AGSLKALELV QQSDDLRRQL
QTNAQLFREL MTEAGFELLE GSHPIIPVMF PGEDGARQAG LIAEELLERG VYVTPFSYPV
VPKGEARIRV QLSAAHSEED VRTCVQAFAD ARDAVAARG