| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_09820 |
|---|
| Symbol | |
|---|
| ID | 8372491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1013210 |
|---|
| End bp | 1014817 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991263 |
|---|
| Product | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
|---|
| Protein accession | YP_003148793 |
|---|
| Protein GI | 256824833 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0743903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CGAACCCCAC CGGGCTGGAG GGGCTGGACC CGCTGGTCAC CCTCACCGCC
CTGCAGATGG CCGAGAAGCT GCGCGACGGC GAGATCACCT CCGAGCAGCT CACCCGCGCG
CACCTCGACC GCATCGAGCA GGTCAACGGC GTCCTCAACG CCTTCCTGGT CGTTGACGCC
GAGGGAGCCC TGGCCACGGC CCGCGAGGTC GATGCCGCCC GCGCCGCCGG CGAGGAGCTC
CACCCCCTGG CCGGCGTGCC GATCGCGGTG AAGGACATCG CCTGCACGCA GGGCCTGCCC
ACCACCGCCG GCTCCCGGAT GTTGGAGGGC TGGGTGCCGC CCTACGACGC CACGATCGTG
CAGCGCCTCA AGGCCGCCCG CATGCCGATC CTCGGCAAGA CCAACATGGA CGAGTTCGCG
ATGGGCTCCT CCACCGAGCA CTCGGCCTTC GGCCCCACCC GCAACCCGTG GGACGTCACC
CGCATCCCCG GTGGCTCCGG CGGTGGCTCC GCCGCCGCCG TGGCCGCGCA CCTGGCCCCG
CTGGCGATCG GCTCCGACAC CGGCGGCTCC ATCCGCCAGC CGGCCGCGGT CACCGGATCG
GTGGGCTCCA AGCCCACCTA CGGCGGGGTC TCGCGCCACG GCATCATCGC CCTGGCCTCC
TCGCTGGACC AGATCGGCCC GTGCTCGCGC ACCGTTGCCG ACTCCGCGGC CCTCCACGAG
GTCATCGGTG GCCACGACCC GGCCGACTCC ACCAGCATCG ACGCCCCGGC CCCCGCCGCG
ACCGCCGCTG CACGCTCCGG CCAAGAGGAC AGCGCCGGCA CCCTGGCCGG CCTGCGCGTC
GGCGTGGTGA AGGAGCTCAC GGACGTCGAC GGCTACCAGG CCGGCGTGAA GGAGCTCTTC
GACCAGCGCA TCGCCCAGCT CCGCGAGGCC GGTGCCGAGG TCGTCGAGGT GTCCTGCCCG
TCGTTCGCCC TGGGCATGGC CGCCTACTAC CTGATCCTCC CCAGCGAGGC CTCCTCCAAC
CTGGCCCGAT ACGACGCCAT GCGCTACGGC CTGCGCGTCG GGCCCGATGG GGTGGACGCC
CCCTCCGCGG AGCAGGTCAT GGCCGCCTCG CGCGACGCCG GCTTCGGCGA GGAGGTCAAG
CGCCGCATCA TCCTGGGCAC CTACGCCCTG TCCAGCGGCT ACTACGACGC CTACTATGGC
AAGGCCCAGA AGGTGCGCAC CCTCATCCAG CGCGACTTCG AGGCCGCGTT CGAGCAGTGC
GACGTCCTGC TCTCCCCGAC GGCGCCCACC ACGGCCTTCC CGCTGGGTGA CAAGCTCGAC
GACCCGCTGG CCATGTACCT GAACGACATC GCCACCATCC CGGTGAACCT CGCGGGCAAC
TGCGCGCTGG GGTTGCCGAT GGGGCTCGCG GCCGAGGACG GCCTGCCGGC CGGCCTGCAG
GTCATCGCCC CGGCCGGTGC CGACGAGCGC ATGTACACCG TCGGGGCCGC CATCGAGGCC
CTCATCGAGG CCACCGACGC CGCGGCCGGC ACCGACCCCG TGCGGATGCG GGTCCCCGCC
GTCCCCGCTG AGCTCCCCGC ATCCGCCACG ACCACCCAGG AGGCCTGA
|
|---|
| Protein sequence | MSETNPTGLE GLDPLVTLTA LQMAEKLRDG EITSEQLTRA HLDRIEQVNG VLNAFLVVDA
EGALATAREV DAARAAGEEL HPLAGVPIAV KDIACTQGLP TTAGSRMLEG WVPPYDATIV
QRLKAARMPI LGKTNMDEFA MGSSTEHSAF GPTRNPWDVT RIPGGSGGGS AAAVAAHLAP
LAIGSDTGGS IRQPAAVTGS VGSKPTYGGV SRHGIIALAS SLDQIGPCSR TVADSAALHE
VIGGHDPADS TSIDAPAPAA TAAARSGQED SAGTLAGLRV GVVKELTDVD GYQAGVKELF
DQRIAQLREA GAEVVEVSCP SFALGMAAYY LILPSEASSN LARYDAMRYG LRVGPDGVDA
PSAEQVMAAS RDAGFGEEVK RRIILGTYAL SSGYYDAYYG KAQKVRTLIQ RDFEAAFEQC
DVLLSPTAPT TAFPLGDKLD DPLAMYLNDI ATIPVNLAGN CALGLPMGLA AEDGLPAGLQ
VIAPAGADER MYTVGAAIEA LIEATDAAAG TDPVRMRVPA VPAELPASAT TTQEA
|
|---|
| |