Gene Ksed_08810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08810 
Symbol 
ID8372390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp900301 
End bp901554 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID644991164 
Productpredicted membrane protein 
Protein accessionYP_003148698 
Protein GI256824738 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0487855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0524825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGA CCGAAGACGA GTTCTGGACC GCCCGCCACT CCACGGAGGA GGTGGAGGGC 
CAGGTGGCCC GCGACCGGGC GGCGCGTCGC CGCGCCCAGG TGGCGCAGTG GGAGCGGGAG
GCCGATCCCG CTGCGCGGCG GGATGCTGGG GACTCCCGTG ACGGTCGCGC ATCGTCCGCC
GGCTCAGCCC CCGGCCGCGA TGGGGACCGC CGCACCGTGG CCTCCCGCGA CGGAGACGAC
GACGAGAAAC TCACCGGCGA CGACTGGAAG CTGGTGGCCC GGCGGGCGCT GTACGAGTTC
ACCGACGACG GGTGCACCGA CCTGGCGGCC GGCCTCACCT ACTTCGCGGT GCTCTCGATC
TTTCCGGCCA TCATTGGTCT GGTGTCGCTG CTGGGCGTGT TCGGCCAGGG GGAGTCCACG
ACTCAGGCCT TCCTGCAGAT CGCGGTGGAC CTCGGGGCCG ACCCGCAGTC GACCGGGTAC
ACCTTCATCG AGGACTTCAT CACCAAGCAG CAGGAGTCCT CCGGTGCCGG GCTCGCGCTG
GCCCTCGGTC TGCTCGGTGC CCTGTGGTCC GCCTCGAACT ACGTCAACGG CTTCAGCCGC
ATGATGAACC GCATCTACGA GGTGCCCGAG GGGCGTCCCT TCTGGGTGCT GCGCCCGGTG
ATGGTGCTGG TCACCGTGCT GGTGCTCCTG CTGGTGGCCG TGCTGGGCCT GTCCTTCGTC
CTGACCGGTC CCGTTGCCGA GTCCGTGTTC GGGGTGGTGG GCCTGGGTGA CCTCGCCACC
ACCATCTGGG CCTGGGCCAA GTGGCCGGCG GCCGCCCTCA TCGTCATCTT CATCATCCGT
CTGCTCTACT GGGCCACCCC GAACGTGAAG TTGCCGCGTC AGATCCTGAC CCCCGGTGCC
ATCCTGGCCT TCCTGATCTG GGTCCTGGCC AGCGCCGCCT TCGGGTTCTA CATCGCCAAC
TTCGGCAACT ACGACGCGAC CTACGGCTCC ATGGCCGGTG TGATCGTCTT CCTGCTGTGG
CTGTGGCTCA CGAACACCGT GCTGCTGCTG GGCGCGGAGA TCGATGCCGA GGCCGAGCGC
ATGCGTGAGC TCAAGCGCGG CCAGCGCGCG GAGGAGGAGA TGACGCTCCA CCTGCGCGGC
GAGGCTGGTG CCGAGAAGGC TGCGAAGAAG GAGCAAGCGC TGGTGGACGA CGCCCGCGAG
GTGCGTCTGG AGGCCACCGC GCAGGCCCCG CCCCGCGCCA GCTCGCGTGA CTGA
 
Protein sequence
MTPTEDEFWT ARHSTEEVEG QVARDRAARR RAQVAQWERE ADPAARRDAG DSRDGRASSA 
GSAPGRDGDR RTVASRDGDD DEKLTGDDWK LVARRALYEF TDDGCTDLAA GLTYFAVLSI
FPAIIGLVSL LGVFGQGEST TQAFLQIAVD LGADPQSTGY TFIEDFITKQ QESSGAGLAL
ALGLLGALWS ASNYVNGFSR MMNRIYEVPE GRPFWVLRPV MVLVTVLVLL LVAVLGLSFV
LTGPVAESVF GVVGLGDLAT TIWAWAKWPA AALIVIFIIR LLYWATPNVK LPRQILTPGA
ILAFLIWVLA SAAFGFYIAN FGNYDATYGS MAGVIVFLLW LWLTNTVLLL GAEIDAEAER
MRELKRGQRA EEEMTLHLRG EAGAEKAAKK EQALVDDARE VRLEATAQAP PRASSRD