Gene Ksed_08460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08460 
Symbol 
ID8372355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp860937 
End bp861611 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content76% 
IMG OID644991130 
Productpredicted branched-chain amino acid permease (azaleucine resistance) 
Protein accessionYP_003148665 
Protein GI256824705 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.644816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCGG CCCAGCGTGC CGGCTGGTCG GTGGGCTTCG CCACCGGGCT CTACGGCATC 
TCGTTCGGGG CGCTGGCGGT GGCCTCGGGG CTGTCCGCCT GGCAGGCGAT CGCCCTGTCG
GCCCTGATGT TCACCGGCGG CTCCCAGTTC GCCTACCTGG GTGTGGTGGG CGCCGGAGGG
AGCGGCGCGG CCGCCACGGG CGCCGCCACC CTCCTGGGCA TCCGCAACAC TGTCTACGCC
ATGCGCCTGA GCACCCTGGT GCGGCCGCGT TCGGTCCCCG AGCGGCTGGC GATGGCGCAG
CTCACCATCG ACGAGTCGAC CGCCGTGGCC GTCGCCCAGG AGTCGCCCGA GGAGCAGCGG
CGCGGCTTCT GGGCGGCGGG GCTGGGCGTC TACGTCTTCT GGGTCGGCTT CAGTGCGCTC
GGCGCCGTGG TGGGTGACCG CATCGGCAAC CTGGACCGAC TCGGCCTGGA CGGGGCTGCG
GTGGCCGCGT TCACGGGCCT GCTGTGGCCG CACCTGCGGT CCCGCCGGCC GGTGGCGATC
GCCGTCCTCG CGGCGGTGGT GACCCTGGCC CTGGTGCCCG CGGTCCCCGC CGGCCTGCCC
ATCCTCGGGG CTGCCCTGGT GGCGGCGGTC GCCGGGTGGG CCCTGCGCCC GACCGACCTG
CGGGAGGCAG CGTGA
 
Protein sequence
MTPAQRAGWS VGFATGLYGI SFGALAVASG LSAWQAIALS ALMFTGGSQF AYLGVVGAGG 
SGAAATGAAT LLGIRNTVYA MRLSTLVRPR SVPERLAMAQ LTIDESTAVA VAQESPEEQR
RGFWAAGLGV YVFWVGFSAL GAVVGDRIGN LDRLGLDGAA VAAFTGLLWP HLRSRRPVAI
AVLAAVVTLA LVPAVPAGLP ILGAALVAAV AGWALRPTDL REAA