Gene Ksed_08190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08190 
Symbol 
ID8372328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp832860 
End bp834641 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content72% 
IMG OID644991103 
Productacetyl/propionyl-CoA carboxylase, alpha subunit 
Protein accessionYP_003148638 
Protein GI256824678 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.253328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.580973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCG TGCTGATCGC CAACCGTGGC GAGATCGCCG TCCGTATCGC CCGCGCCTGC 
GCTGACGCGG GCATCCGTTC CATCGCCGTC TACGCCGACG CCGACCGCGA CGCCCTCCAC
ACCAAGGTGG CCGACGAGGC CTACTCGATC GGGGGCAACA CCCCCGGCGA GTCCTACCTG
GTGGTGGAGA AGCTCCTCCA GGTGGCCAAG GAGGCCGGCG CCGACGCCGT GCACCCCGGC
TACGGCTTCC TCTCGGAGAA CGCCGACTTC GCCCAGGCCG TCATGGACGC CGGGCTCACC
TGGATCGGCC CGCCGCCGTC CGCCATCGAC TCCCTCGGCG ACAAGGTCAA GGCCCGCCAC
ATTGCCGATG CGGCGAACGC GCCCCTGGTG CCGGGCACCA AGGACCCGGT CGAGTCCGCC
GACGAGGTGC TCGCCTTCGC CGACGAGCAC GGCCTGCCGG TCGCCATCAA GGCGGCCTAC
GGCGGTGGCG GCCGCGGCCT GAAGGTCGCC CGCACCCGCG AGGAGATCCC TGAGCTGTAC
GACTCGGCGG TCCGCGAGGC CGTCGCCGCC TTCGGGCGCG GCGAGTGCTT CGTCGAGCGC
TTCCTCGACT CCCCGCGCCA CGTCGAGACC CAGTGCCTGG CCGACCAGCA CGGCAACGTC
GTGGTGGTCT CCACCCGTGA CTGCTCGCTG CAGCGCCGCA ACCAGAAGCT CGTGGAGGAG
GCCCCGGCCC CCTTCGTGAC CCCGGAGCAG GACGCCGAGC TGCGCCGCGC CTCCAAGGAC
ATCCTCAAGG CCGCCGGCTA CGTGGGCGCC GGCACCTGCG AGTACCTCAT CGGCACCGAC
GGCACCATCA GCTTCCTCGA GGTCAACACC CGCCTGCAGG TGGAGCACCC CGTGACCGAG
GAGGTCACCG GCATCGACCT GGTGCGCGAG CAGTTCCGCA TCGCCGCCGG CGAGGAGCTG
GGCTACGACG ACCCCGAGGT GCGCGGTCAC TCCATCGAGT TCCGCATCAA CTCCGAGGAC
GCGGGCCTGA ACTTCATGCC GTCGCCCGGC ACCGCCTCCA CCTTCCGTCC CCCGCTGGGC
CCCGGCGTCC GCGTGGACTC CGGCATGGTG GAGGGCGATG CGGTGGCCGG CGCCTTCGAC
TCGATGCTCG CGAAGCTGAT CGTCACCGGC CGCACCCGCA CCGAGGCCAT CGAGCGCTCC
CGCCGCGCGC TGGACGAGTT CGTCGTCGAC GGCATGCCCA CCGTGCTGCC CTTCCACCGT
GCCGTGGTGC GCGACGAGGC CTTCGCCCCG TCCGACCCCG ACCAGGCCTT CAGCGTGCAC
ACCCGCTGGA TCGAGACCGA GTTCGACAAC ACCATCGAGC CCTACGCCGG CCAGACCGCC
GAGGCCGAGG AGAAGGCCCC GCGCCAGGAG ATCCTGGTCG AGGTCAACGG CCGCCGCATG
GCCGTCAGTC TGCCGGGCGA CCTCGCGCTC GGGGGCGGTG GTGCCGCTGG TGGCGGTGCA
CGCAAGAAGG CCCCGAAGCG CTCCCGCGGT GGTGGCGGCG CGGCCGCGGC CTCCGGCGAC
GCGGTGACCG CCCCCATGCA GGGCACCATC GTGAAGGTGG CCGTCGAGGA GGGCGCGACC
GTGGCCGAGG GCGACCAGGT CGTCGTGCTC GAGGCCATGA AGATGGAGCA GCCCATCAAG
GCCCACAAGG CCGGTGTGGT CACCGGGCTG AAGGCCGCCG TGGGCGAGAC CGTCAACAAC
GGTGGCGTGA TCTGCGAGAT CAAGGACGCA CCCGCCGAGT GA
 
Protein sequence
MTSVLIANRG EIAVRIARAC ADAGIRSIAV YADADRDALH TKVADEAYSI GGNTPGESYL 
VVEKLLQVAK EAGADAVHPG YGFLSENADF AQAVMDAGLT WIGPPPSAID SLGDKVKARH
IADAANAPLV PGTKDPVESA DEVLAFADEH GLPVAIKAAY GGGGRGLKVA RTREEIPELY
DSAVREAVAA FGRGECFVER FLDSPRHVET QCLADQHGNV VVVSTRDCSL QRRNQKLVEE
APAPFVTPEQ DAELRRASKD ILKAAGYVGA GTCEYLIGTD GTISFLEVNT RLQVEHPVTE
EVTGIDLVRE QFRIAAGEEL GYDDPEVRGH SIEFRINSED AGLNFMPSPG TASTFRPPLG
PGVRVDSGMV EGDAVAGAFD SMLAKLIVTG RTRTEAIERS RRALDEFVVD GMPTVLPFHR
AVVRDEAFAP SDPDQAFSVH TRWIETEFDN TIEPYAGQTA EAEEKAPRQE ILVEVNGRRM
AVSLPGDLAL GGGGAAGGGA RKKAPKRSRG GGGAAAASGD AVTAPMQGTI VKVAVEEGAT
VAEGDQVVVL EAMKMEQPIK AHKAGVVTGL KAAVGETVNN GGVICEIKDA PAE