| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07810 |
|---|
| Symbol | |
|---|
| ID | 8372290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 788348 |
|---|
| End bp | 789979 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644991067 |
|---|
| Product | IMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase |
|---|
| Protein accession | YP_003148602 |
|---|
| Protein GI | 256824642 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.175949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.622772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA CCGACACCGT CCGGCCCATC CGCCGCGCCC TGATCAGCGT CTACGACAAG
ACGGGCCTGG ACGAGCTCGC CCGGGGCCTA GCCGACGAGG GGGTCGAGAT CGTCTCCTCC
GGCGGGTCCG CAGCCCACCT GCGCGAGATC GGGGTCCCGG TCACCGCGGT CGAGGAGGTC
ACCGGCTTCC CCGAGTGCCT CGACGGGCGG GTCAAGACGC TGCACCCGGC CATCCACGCC
GGCATCCTGG CCGACCGCAC GCGCGCGGAC CACAGCGCGC AGCTGGAGGA CCTCGGGGTG
GCCGGGTTCG ACCTGGTGGT GGTGAACCTC TACCCCTTCG CCGAGACCGT GGCCTCGGGC
GCCGACCGTG CGGCCATCAT CGAGAAGATC GACATCGGCG GGCCGTCGAT GGTGCGTGGC
GCCGCCAAGA ACCACGCGAG CGTGGCGGTG GTGGTGGACC CCACGTCCTA CCCACAGGTG
CTCGATGCGG TGCGCGCCGG CGGGTTGGAC CTGGCGACCC GCGTGCAGCT CGCCACCCGC
GCCTTCGCCC ACACCGCGGC CTACGACGTG GCCGTCTCGA CGTGGATGGC CGAGCAGGGC
ACCGTCGGCG CCGCACCGGA TGCGTCGGTC GAGTCGGACG CGACGGGTGG CGACCGTCCG
GCCCCCGCCT TCGCCGCCGA CCGTTCGGCG GCCTGGGAGC TCGCCGAGAC CCTGCGCTAC
GGGGAGAACC CGCACCAGGC GGCCGCGCTC TACCGCGAGC CGCAGGCGGG GGAGCGGGTG
GCGCCGGGCG TGGCCTCGGC GGTGCAGCTG CACGGCAAGG CGATGAGCTA CAACAACTAC
GTCGACGCCG ATGCCGCGTG GCGGGCCGCC CACGACCACG GCGACCAGCC GACCGTGGCG
GTCGTCAAGC ACGCCAACCC GTGTGGGATC GCGGTGGGGC CGGACATCGC CACGGCCCAC
GAGCGCGCCC ACGCGTGCGA TCCGGTGAGC GCCTTCGGGG GCATCATCGC GGCCAACCGG
GAGGTCACCG AGGAGATGGC CTCCACCGTG GCCGGCATCT TCACCGAGGT GGTGATCGCC
CCCTCGTTCG CCCCGGCGGC CGTGGAGCTG CTCACCGCCA AGAAGAACAT CCGCCTGCTC
ACCGCCGTCG CCCCGCAGCG CCAAGGGTTG GAGCTCCGCC CCATCAGCGG GGGCCTGCTG
GTCCAGCAGC GCGACGTGCT GGACGCCCCG GGTGACGTGG CGCGGGCGTG GGAGCACGTG
TCCGGCGAGC CGGCCGACGA GGCGACCCTG GCCGATCTGC AGTTCGCCTG GCGGGCCGTG
CGCGCCACCA AGTCCAACGC GATCCTGCTG GCGAAGGACG GCGCGAGCGT CGGCATCGGC
ATGGGCCAGG TGAACCGGGT GGACTCCTGC CACCTGGCGG TCTCCCGGGC GGGACGGGAG
CGAGCTCGCG GCGCGGTCGC CGCATCGGAC GCCTTCTTCC CCTTCGCCGA CGGCCTCCAG
GTGCTCCTGG ACGCCGGGGT CCGGGCGGTG GTGCAGCCCG GTGGGTCGAT GCGGGACGAG
GAGGTCGTCA CCGCCGCGCG GGAGGCCGGG GTGACCATGT ACCTGACCGG CACCCGGCAC
TTCGCGCACT GA
|
|---|
| Protein sequence | MTPTDTVRPI RRALISVYDK TGLDELARGL ADEGVEIVSS GGSAAHLREI GVPVTAVEEV
TGFPECLDGR VKTLHPAIHA GILADRTRAD HSAQLEDLGV AGFDLVVVNL YPFAETVASG
ADRAAIIEKI DIGGPSMVRG AAKNHASVAV VVDPTSYPQV LDAVRAGGLD LATRVQLATR
AFAHTAAYDV AVSTWMAEQG TVGAAPDASV ESDATGGDRP APAFAADRSA AWELAETLRY
GENPHQAAAL YREPQAGERV APGVASAVQL HGKAMSYNNY VDADAAWRAA HDHGDQPTVA
VVKHANPCGI AVGPDIATAH ERAHACDPVS AFGGIIAANR EVTEEMASTV AGIFTEVVIA
PSFAPAAVEL LTAKKNIRLL TAVAPQRQGL ELRPISGGLL VQQRDVLDAP GDVARAWEHV
SGEPADEATL ADLQFAWRAV RATKSNAILL AKDGASVGIG MGQVNRVDSC HLAVSRAGRE
RARGAVAASD AFFPFADGLQ VLLDAGVRAV VQPGGSMRDE EVVTAAREAG VTMYLTGTRH
FAH
|
|---|
| |