Gene Ksed_07800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07800 
Symbol 
ID8372289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp787722 
End bp788351 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content76% 
IMG OID644991066 
Productphosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 
Protein accessionYP_003148601 
Protein GI256824641 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.463663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.355884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGG TCCAGCTCGG CCCCACCTCC CACCGCCTGC GCGTGGTCGT CCTGCTCTCC 
GGAGCCGGTT CCACAGCCCG GGCGGTCCTC GATGCGGCCG ACGGCACAGC GCCCTTCGAG
GTGGTCGCGG TGGTGGCCGA CCGGCCCGCC GAGGGGCTGG ACCACGCGGC CACCCGCGGC
CTGCCCACGG CCCTGGTGGC CCCGGCCGAC CACGCCGACC GGGCCGCGTG GGACGCAGCG
CTGGCCCAGG TCGTCGCCGT CCACCGCCCC GACCTGGTGC TCTCGGCGGG GTTCATGCGC
CTCCTCGGCC CGGCCTTCCT CGAGCGCTGG GGCGGGCTGA CCCTCAACTG CCACCCGGCC
CTGCTGCCCT CCTTCCCCGG TGCGCACGGG GTGCGGGACG CGCTGGAGCA CGGCGTGGCC
GTCACCGGGT GCACCCTCCA CCTCGTCGAT GCGGGGACCG ACACCGGCCC GATCCTGGAC
CAGCGCGCCG TGCGCGTGGA GCCCGGGGAC GACGAGGCCA CCCTCCACGA ACGCATCAAG
GTCGCCGAGC GCGAGCTCCT GGTGACCACG CTGACCCGCA TCGCCACCGG CGGTGTGACC
CTCCACGACC GAAAGGCCAC CTGGGCATGA
 
Protein sequence
MTQVQLGPTS HRLRVVVLLS GAGSTARAVL DAADGTAPFE VVAVVADRPA EGLDHAATRG 
LPTALVAPAD HADRAAWDAA LAQVVAVHRP DLVLSAGFMR LLGPAFLERW GGLTLNCHPA
LLPSFPGAHG VRDALEHGVA VTGCTLHLVD AGTDTGPILD QRAVRVEPGD DEATLHERIK
VAERELLVTT LTRIATGGVT LHDRKATWA