| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07460 |
|---|
| Symbol | |
|---|
| ID | 8372255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 749670 |
|---|
| End bp | 750572 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644991032 |
|---|
| Product | lysophospholipase |
|---|
| Protein accession | YP_003148567 |
|---|
| Protein GI | 256824607 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0863462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCACC GGTGGACCAC CCGCCAGGAC CGCGAGCTCC ACACCCTGGT GCAGGGGCCA
CCGCCGGAGC AGGCGCGGGC CACGGTCGTC CTGACCCACG GGTACGTGCT CTCCTCGGGC
ATCTTCGGGC CGGTCGCGCG GGAGCTCGCG GCCGCGGGCG TGCACGTGGT GCGGCCGGAC
CTCGCCGGCC ACGGCTGGTC CCGGGCCGGG GCCGGCGAGC TGGACCTGCC CACCCTGGCC
GACGATCTCG CCCAGGTGGT GGAGGAGCTC GACCTCCCCG CCGACCACCG GCTGGTGCTC
CTCGGTCACT CGATGGGGGG CATGGTCACC ATGCAGCTGC TCGAGCGCCA CCCCGGGCTG
GCCGCCCGGG TGGACGGGCT GGTCTGGCTG GCGACCTCCC CGGGGGGCAT GGCCTCCTCG
CCCTTCGGCA TGCCGCTGCG CACCGCGGCC CTGGTCGGCC CCCTGGTCAG CCGCCTGGGC
CCCCGGGTGA TGTCCCGTGC CGCGCGCGGC GACGACCAGC GGCGGCCCCG GCCCCGCGCC
GCCGCGCTGG AGGTGGAGCT GGCCCACCTG GCACGGAGCA ACTTCGCCGG CCGTCCCTCC
CGGGCGGTCC TGCGTCAGGT GGCGGCGATG CACCACCGAG TGCCCTACCG CGTGCTCTCG
CAGCTGCTCA CCTCGATCCT GGCCCACGAC GCGCGGGAGG TGCTGGCCGG TCTGGACCGG
CCGGGGCTGG TCCTCATCGG CGATGATGAC CGCATGACGC CCCACAGCCA CTCCGTCGAG
ATCGCGGACC TGCACCACGG CGCCCGGCTG CAGGTGATCG AGGGGGCCGG CCACCTGGCG
ATGGTGGAGC GGCCCCACGA GGTCGCCGTG GCCGTGCTCG ACCTCATCGA GGAGCTCCGG
TGA
|
|---|
| Protein sequence | MRHRWTTRQD RELHTLVQGP PPEQARATVV LTHGYVLSSG IFGPVARELA AAGVHVVRPD
LAGHGWSRAG AGELDLPTLA DDLAQVVEEL DLPADHRLVL LGHSMGGMVT MQLLERHPGL
AARVDGLVWL ATSPGGMASS PFGMPLRTAA LVGPLVSRLG PRVMSRAARG DDQRRPRPRA
AALEVELAHL ARSNFAGRPS RAVLRQVAAM HHRVPYRVLS QLLTSILAHD AREVLAGLDR
PGLVLIGDDD RMTPHSHSVE IADLHHGARL QVIEGAGHLA MVERPHEVAV AVLDLIEELR
|
|---|
| |