| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_06120 |
|---|
| Symbol | |
|---|
| ID | 8372121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 606185 |
|---|
| End bp | 607579 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644990900 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_003148443 |
|---|
| Protein GI | 256824483 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.140424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC ACTATGACGT CGTTGTCCTT GGCGCGGGCC CCGGTGGCTA CGTCGCCGCC
ATCCGTGCCG CCCAGCTCGG CAAGAAGGTT GCCGTCATCG AGAAGAAGTA CTGGGGCGGT
GTCTGCCTGA ACGTCGGCTG CATCCCGTCC AAGGCGCTCC TGCGCAACGC GGAACTCGCG
TACACGCTGA CCAAGGAGAA GAAGACCTTC GGCATCGAGG GCGACGCCAC CATGTCCTAT
GGGCCGACCC ACTCGCGTAG CCGCAAGGTC TCCGAGGGCA TCGTCAAGGG CGTCCACTTC
CTCATGAAGA AGAACAAGAT CACCGAGATC GACGGCTGGG GCACCATCCA GTCCGACTCG
ACCGTCTCGG TGGACCTCAA CGACGGCGAG ACCCAGGAGG TCACCTACGA CCACCTCATC
ATCGCCACCG GCGCGACCAC CCGGATGATC CCCGGCGTCG AGCTCAGCGA GAACGTCGTC
ACCTACGAGG AGCAGATCCT CGACGAGGAG CTGCCCGAGT CGATCATCAT CGCCGGCTCC
GGCGCCATCG GCGTGGAGTT CGCCTACGTG ATGGCGAACT TCGGGGTGAA GGTGACCATC
GTGGAGTTCC TGGACCGCAT GGTGCCCACC GAGGACGAGG AGATCTCCAA GGAGCTCCTC
AAGCACTACA AGAAGCTCGG CGTGGACGTG AAGCTCTCCA CCAAGGTGGA GAAGGTCGAG
GACACCGGCT CGGGCGTGAA GGTCACCGTG AGCAAGGACG GCTCCGAGGA GGTCCTCGAG
GCCGACCGCC TGCTCTCGGC GATCGGGTTC GCCCCCCGCA TCGAGGGCTA CGGCCTGGAG
AACGTCGGGG TCGAGACCAC CGAGCGCGGT GCCATCGACA TCGACCAGTG GGGCCGGACA
GCGGTGGAGA ACATCTACGC CATCGGTGAC GTCACCGGGA AGTTGATGCT CGCCCACACT
GCCGAGGCCA TGGGCGTCGT CGCCTCCGAG CGCATCGCCG GTGCCGACAC GATGCCGGTG
GAGTTCGACT TCATCCCGCG CGCCACCTAC TGCCAGCCGC AGATCGCGTC GTTCGGCTAC
TCCGAGGCCC AGGCCAAGGA GAAGGGCTAC GACGTGAAGG TCTCGAAGTT CCCCTTCTCC
GCCAACGGGA AGGCGATGGG CTTCGGCGAT GCCCGCGGGT TCGTCAAGGT GGTGGCCGAC
GCCGAGCACA ACGAGATCAT CGGCGCCCAC ATGATCGGCC CGGAGGTCAC CGAGTTGCTG
CCGGTGCTGA CCCTGGCCCA GAAGTGGGAC CTCACCGCCG ACGAGGTGGC TCGCAATGTG
TTCGCCCACC CGACGCTGTC CGAGTCGGTC AAGGAGGCCG TCGAGGGCAT CGCCGGCCAC
ATGATCAACC TCTGA
|
|---|
| Protein sequence | MADHYDVVVL GAGPGGYVAA IRAAQLGKKV AVIEKKYWGG VCLNVGCIPS KALLRNAELA
YTLTKEKKTF GIEGDATMSY GPTHSRSRKV SEGIVKGVHF LMKKNKITEI DGWGTIQSDS
TVSVDLNDGE TQEVTYDHLI IATGATTRMI PGVELSENVV TYEEQILDEE LPESIIIAGS
GAIGVEFAYV MANFGVKVTI VEFLDRMVPT EDEEISKELL KHYKKLGVDV KLSTKVEKVE
DTGSGVKVTV SKDGSEEVLE ADRLLSAIGF APRIEGYGLE NVGVETTERG AIDIDQWGRT
AVENIYAIGD VTGKLMLAHT AEAMGVVASE RIAGADTMPV EFDFIPRATY CQPQIASFGY
SEAQAKEKGY DVKVSKFPFS ANGKAMGFGD ARGFVKVVAD AEHNEIIGAH MIGPEVTELL
PVLTLAQKWD LTADEVARNV FAHPTLSESV KEAVEGIAGH MINL
|
|---|
| |