Gene Ksed_05620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05620 
SymbolpyrE 
ID8372071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp562954 
End bp563511 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content74% 
IMG OID644990851 
Productorotate phosphoribosyltransferase 
Protein accessionYP_003148394 
Protein GI256824434 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.0920693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.821582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG CAGCGTCCTC CGTCAAGCAG CAGCTCGCCG ACACCATCGC CGCCGATGCG 
GTGGTGTACG GCCGGGTGAC CCTCTCCTCC GGCAAGGAGG CCGACTACTA CGTCGACCTG
CGCCGGGTGA CGCTCTCGGG CAGTGCGGCG CCGCTGGTGG GCCGGGCGAT GCTGGAGCTC
ACCGCGGACT TCGAGTTCGA CGCCGTGGGT GGCCTGACCA TGGGGGCCGA TCCGGTGGCC
ACCGCGATGC TGCACGCCGC GGCCGCGCAG GGTCGCCCCC TGGACGCGTT CGTCGTGCGC
AAGGCCGGCA AGGCCCACGG CCTGCAGCAG CGCATCGAGG GTCCCTCCAT CGAGGGGCGC
CGGGTGGTGG TGGTGGAGGA CACCTCGACC ACGGGCAACT CGCCGCTCAC CGCCGTCGAG
GCCGCCCGGG AGGCCGGTGC CGAGGTGGTG GCCGTCGCCG TGATCGTGGA CCGGTCCTCC
GGGGCGCGGG AGGCCGTGGA GGCGCAGGGC GTCGAGTACC GGGCGGCCCT GGGGCTGGGC
GACATCGGCC TGGCCTGA
 
Protein sequence
MTSAASSVKQ QLADTIAADA VVYGRVTLSS GKEADYYVDL RRVTLSGSAA PLVGRAMLEL 
TADFEFDAVG GLTMGADPVA TAMLHAAAAQ GRPLDAFVVR KAGKAHGLQQ RIEGPSIEGR
RVVVVEDTST TGNSPLTAVE AAREAGAEVV AVAVIVDRSS GAREAVEAQG VEYRAALGLG
DIGLA