Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_05400 |
Symbol | |
ID | 8372049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 533666 |
End bp | 534490 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644990829 |
Product | short-chain dehydrogenase of unknown substrate specificity |
Protein accession | YP_003148372 |
Protein GI | 256824412 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACGA TCGTCATCAC CGGAGCCAGT GACGGCATCG GCGCGGCAGC CAGCCGACAG CTCGCGGAGA CCGGCGCACG GCTGATCCTC GTAGGGCGTT CGCCGGAGAA GACCAGCGCG GTCGCCGCCG CCACCGGTGC CGAGCACTAT GTCGCCGACT TCGCCAGGCT CGACGACGTA CGCCGCCTCG CCGGCGAGCT GAACGAGGTC TGCGAGCGGA TCGACGTGCT GGCGAACAAC GCGGGCGGCA TGTTCTCCGG ACCGACAGTC ACCCAGGACG GCTTCGAGAA GACCTTCCAG ATCAACCACC TCGCCCCGTA TCTGCTCACG CACCTGCTGA TCGACAAGTT GCTCGACAGC CGCGCGGCCG TTGTCAACAC CTCCAGCATC GGCGCGAGAC TGTTCGGCCA CATCGACCTC GAGGACCTGA ACAACTGGGA GGGGTTCTCA CCGAACAAGG CCTATGGCGA CGCCAAGCTC GCCAACATCC TGTTCACCAA GGAGCTGCAC GAGCGCTTCC ACGGCCGGGG CCTCTCCTCA GTCGCATTCC ATCCTGGCAA TGTCGCGACG AACTTCGCCT CGGACACAGA CAGCTACTTC CAACGCGTCT ACCACGGCGC GCTCAGGGCG TTCCTGATCT CCCCAGAGCA GGGAGGAGCA CGCCTGCGGC ACTTCATCGA GGGTCAACCG GGCCGGGCGT GGACATCGGG GGAGTACTAC GGTGCACCGG GCCGGATCGG CCGCACGAAC AGGCAGGCCT ACGACGCCGG TATCGCGGTT GAGCACTGGC GGCGAAGCGC GGCCATGCTC AGCATCGACT GGTGA
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Protein sequence | MRTIVITGAS DGIGAAASRQ LAETGARLIL VGRSPEKTSA VAAATGAEHY VADFARLDDV RRLAGELNEV CERIDVLANN AGGMFSGPTV TQDGFEKTFQ INHLAPYLLT HLLIDKLLDS RAAVVNTSSI GARLFGHIDL EDLNNWEGFS PNKAYGDAKL ANILFTKELH ERFHGRGLSS VAFHPGNVAT NFASDTDSYF QRVYHGALRA FLISPEQGGA RLRHFIEGQP GRAWTSGEYY GAPGRIGRTN RQAYDAGIAV EHWRRSAAML SIDW
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