Gene Ksed_05240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05240 
Symbol 
ID8372033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp518881 
End bp519600 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID644990816 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003148359 
Protein GI256824399 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC GCGCTGAGAA CATCTCCGTG GGGTACCGCA GGAAAGTGGT CTTCGAGGAG 
CTCGACTGGA CGTTGCGCCC TGGGGACCGT GTGGTGCTGC TCGGCCCCAA CGGAGCCGGA
AAGACCTCAC TGATGAAGAC CTGCGCAGGC CTCCTGCGCC CACGGGGTGG TCGTGTCGCC
ACCCACGAGC ACGAGGCCGC CACACCGCAG GAGCTGGCTG AAGCCGTCGC TCTCATGCCG
CAGCAGATCA CGGCCGTCCC CCGACTGTCC TGTCGCGAGC AGGTCGCCTA TGCCGGGTGG
CTCGCGGGGC TCCCCACCTC CGAGGCCGAA CAGCGAGCCG ACGGCGCCCT GGTAGCAGTA
GGTCTGACCG ACCAGGCCGC CACGCGGTCC AAGGCACTCT CGGGCGGACA GTTGCGGCGT
CTGGGGCTGG CCGAGTCGCT GGTCAGGCGC ACTGGGGTGC TGCTCCTGGA CGAGCCCACC
GCGGGTCTCG ACCCCGCTCA ACGGGCCCGT TTCCGCCGCG TGCTGGCCGA CCTTCCGCCG
GAGAACACGG TGGTGGTCAG CACCCACGAG ACGCACGACA TCGCCGAGGC CTTCACCCGT
GTGTGCATCC TTGACTCTGG GCGCTTCGTC TTTGATGGCT CCCCGGAGGA ACTGCTCGAG
CGGACGGGTG CCCACACCAT CGAGCTGGCG TACGCCCAGA TCATGGAGAA CGCTGCATGA
 
Protein sequence
MTLRAENISV GYRRKVVFEE LDWTLRPGDR VVLLGPNGAG KTSLMKTCAG LLRPRGGRVA 
THEHEAATPQ ELAEAVALMP QQITAVPRLS CREQVAYAGW LAGLPTSEAE QRADGALVAV
GLTDQAATRS KALSGGQLRR LGLAESLVRR TGVLLLDEPT AGLDPAQRAR FRRVLADLPP
ENTVVVSTHE THDIAEAFTR VCILDSGRFV FDGSPEELLE RTGAHTIELA YAQIMENAA