Gene Ksed_04330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04330 
Symbol 
ID8371943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp426146 
End bp427132 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content74% 
IMG OID644990729 
Productpredicted ornithine cyclodeaminase, mu-crystallin 
Protein accessionYP_003148272 
Protein GI256824312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.861698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AACTGCTCGT GCTGACCGCC GCCGAGATCG AGGGCCTGCT GGACCTCGAT 
GCCGTCTTCG CCTCGCAGGT GCGCGCCTTC GAGGGGCTGG GCTCCGGGCG CGCCGAGCTG
GCGCCGAAGG TGTCCGTGCC CGGCCGCGAG GGCGCCAGCC TGCTCACCTA CACCGCACGC
AGCACCACCG AGGCGCCGGG CGTGGTGAAG GTGATCGGTT TCCAGCCGCA GAACCCCGCC
AACGGCCTCG ACCCGGTGCA GGGCGTGGTG CTGGTGGTGG ACCCCGACAC CGGGCAGCCC
GTCGCGCTGC TGGACGGCCC TGCCCTGACC ACCCCGCGCA CCGCCGCCGG CAGCGCCGTG
GCCATGGACC TGCTGGCGCG GGCCGATGCG GCTGTGCTCA CCATCGTGGG CACCGGCGTG
CAGGCGCGGG CCCACCTGCG TGCGCTGAGC CGGGTGCGGG AGCTCGAGCG GATCCACCTC
ATCGGGCGTC GCGCCGAGGC CGCCGAGGAG CTCGCGGCCG AGCTGGCGGA CGAGCTCGGG
GTGCCCATCG TCCCGGGCAC CGACCTGCCT GCCGTGGCGG GTGAGAGCGA TGTCATCGCG
CTGTGCACCA CCAGTCACAC CCCCCTACTC GATGCGGGGA ACGTGCGCCC GGGCGCGCTG
GTCATCAGCG TCGGGTCGTT CGCGCCCGAC CGCAGCGAGG TGGGTGCCGA CCTGCTGGGG
CGGGCCGAGC TGCTGGTGGT CGACGAGGTG GCCACCGCAT CGGCGCAGGC GGGCTGCATC
ATCGATGCGG TGGCCGCGGG GGTGCTGGCC GAGTCCGCGC TGGTGCCGCT GGGCAGCATC
GCGACCGGGG CGCACCCGGG GCGGGCGAGC GACGAGGACG TGGTGTTCTA CAACTCGGTG
GGCATCGCGG TGCAGGACGC CACCATCGCC GAGGAGGTCC TGGACCGCGC CCGCGCCGCA
GGGGTCGGCA CCACCGTCAC CCTCTGA
 
Protein sequence
MTTELLVLTA AEIEGLLDLD AVFASQVRAF EGLGSGRAEL APKVSVPGRE GASLLTYTAR 
STTEAPGVVK VIGFQPQNPA NGLDPVQGVV LVVDPDTGQP VALLDGPALT TPRTAAGSAV
AMDLLARADA AVLTIVGTGV QARAHLRALS RVRELERIHL IGRRAEAAEE LAAELADELG
VPIVPGTDLP AVAGESDVIA LCTTSHTPLL DAGNVRPGAL VISVGSFAPD RSEVGADLLG
RAELLVVDEV ATASAQAGCI IDAVAAGVLA ESALVPLGSI ATGAHPGRAS DEDVVFYNSV
GIAVQDATIA EEVLDRARAA GVGTTVTL