Gene Ksed_03900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03900 
Symbol 
ID8371900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp378012 
End bp378659 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content72% 
IMG OID644990686 
Productputative NADH-flavin reductase 
Protein accessionYP_003148230 
Protein GI256824270 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0627666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA TCCTGATCAT CGGAGGACAC GGCAAGATCG CCCTGCAGGC CGCCCGGCTG 
CTGGCCGAGC GCGGGGACCG GGTGACGAGC GTCATCCGCA AGCCCGAGCA GCAGGACGAC
GTGGCCGCCA CCGGTGCCAC GCCACTGGTG CTCGACGTCG AGCACGCCCA GCACGCCGAC
CTGGTGCAGG CGATGCGGGG CAAGGACGCC GTGGTGTGGT CGGCTGGCGC CGGTGGCGGC
GACCTGGCCC GCACCTACGG GGTCGACCAG AAGGCCGCCA TCGCATCCAT GAAGGCCGCC
CGCGACGCCG GGGTCCCCCG CTACGTCATG GTCAGCTTCT TCGGTGCCCA GCTGGACCAC
CCGCTGCCCT TCGACATGGG CTTCTTCCAC TACACCCAGG CCAAGGCCGT GGCCGACGCC
TACCTGCGGG AGAGCTCCCT GGCGTGGACG ATCCTCGCCC CCAGCAAGCT CACCGAGGAC
GCCGGCACCG GCCGCGTGGA CACCACCGCC GCCGAGGCCA CGGAGGTGCC GCGCGCCGAC
GTCGCCGCGG CGATCGCGCA CGTGTTGGGC GAGGGTGCCC ACGCGTCGCT GCGCCGCACC
ATCACCCTGA ACACCGGTGG GACGCCGCTG GCCGAGGCGA TCGCGTGA
 
Protein sequence
MTDILIIGGH GKIALQAARL LAERGDRVTS VIRKPEQQDD VAATGATPLV LDVEHAQHAD 
LVQAMRGKDA VVWSAGAGGG DLARTYGVDQ KAAIASMKAA RDAGVPRYVM VSFFGAQLDH
PLPFDMGFFH YTQAKAVADA YLRESSLAWT ILAPSKLTED AGTGRVDTTA AEATEVPRAD
VAAAIAHVLG EGAHASLRRT ITLNTGGTPL AEAIA