Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_03830 |
Symbol | |
ID | 8371893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 369774 |
End bp | 370640 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644990679 |
Product | trehalose-phosphatase |
Protein accession | YP_003148224 |
Protein GI | 256824264 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.872601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0458529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA CCACCCGCAC CCCCGAACCG GCCGCGAGCG CCGGGGCGCC GCTCCCGCCC CCGGACCAGG CGCACCTGGC GCGGACCCCG TGGCTGGTGG TCGCGACCGA CTTCGACGGC ACCCTGGCCC CCTTCCAGGA CGACCCGATG GCCGTCGTCC CCCACCCCGA CTCCATCGCC GCCCTGCGTC GGCTGGCCGC CCTGCCGACC ACCCAGGTGG TCCTGGTGAG CGGCCGTGAC GTCACCACCC TTCACCAGCT CAGCGGGCTG GGCCCGCAGG ACGGTGTCTC CCTGCTCGGG TCCCACGGCG GCGAGCAGTG GCGGGTGGGC CAGGACGCCC CCACCGGCCT GGACGAGGAC GAGGTGGCCC AGCGGGACAT GCTGATCGCC GGCGCCCGCG GACTGGTGGC CGAGCACCCC GGGACCACGC TGGAGGTGAA GGCCGCCGGC GTGGTGGTGC ACACCCGGCG AGCGACCCCG GAGGTGGCCC TCGCGGCACG CGGTGCCGTG CGACGGCTGG GCCGCCGCTG CGGCGTGGAA CCCCTGCTGG GCAAGGACGT GCTCGAGCTG AGCGTGCTGC GCACCACCAA GGGCGAGGCT CTCGCGGAGC TCGTGCACCG CCTGGGGCAG GACCGCTGGA ACCGGCGCAG CCACCGCGAG CGCACTCCCG GGTACACCCT GTGGTTCGCC GGCGACGACG TCACCGACGA GACGGTGTTC CGGGCGTTCG CCGACGAGGC CGGCGCGGTG CTGGTCAAGG TGGGGCCGGA GCCCACCTGT GCGAGCTCCC GCGTGGACGG CATCGACGAC GTCGCCCGGT TGCTGACCGA GCTCGCCGAC GCCCGGGAGG CCGCCGCAGC AGGCTGA
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Protein sequence | MTDTTRTPEP AASAGAPLPP PDQAHLARTP WLVVATDFDG TLAPFQDDPM AVVPHPDSIA ALRRLAALPT TQVVLVSGRD VTTLHQLSGL GPQDGVSLLG SHGGEQWRVG QDAPTGLDED EVAQRDMLIA GARGLVAEHP GTTLEVKAAG VVVHTRRATP EVALAARGAV RRLGRRCGVE PLLGKDVLEL SVLRTTKGEA LAELVHRLGQ DRWNRRSHRE RTPGYTLWFA GDDVTDETVF RAFADEAGAV LVKVGPEPTC ASSRVDGIDD VARLLTELAD AREAAAAG
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