Gene Ksed_03420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03420 
Symbol 
ID8371852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp328893 
End bp330245 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content71% 
IMG OID644990638 
ProductNADPH-dependent glutamate synthase beta chain-like oxidoreductase 
Protein accessionYP_003148184 
Protein GI256824224 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.672031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGTTG CTGTCATCGG CGCCGGCCCG GCGGGAATCT ACGCCGCGGA CATCCTCACC 
AAGGAGCTCG AGCAGGCCAG CGTCGACGTC TACGACCGCC TGCCCGCGCC GTACGGCCTG
GTGCGTTACG GGGTGGCCCC GGATCACCCG CGCATCAAGG AGATCGTCAA GGCCCTGCGC
CGGGTCCTGG CGGGCGACCA GATCCGGTTC ATCGGGAACG TCGACTTCGG CACGGACGTG
ACCTTCGAGC AGCTGCGCGA GAACTACGAC GCCGTCATCT TCGCCACCGG GGCGATGGGC
GACCGCCCGC TGGACATCCC CGGCATCGAG AAGGAGGGGT CGTTCGGCGC CGCCGACTTC
GTGAGCTGGT ACGACGGCCA CCCCGACGTG CCGCGCGAGT GGCCGCTGGA GGCCGAGTCC
GTGGCCGTGA TCGGCGCCGG GAACGTGGCG CTGGACGTGG CGCGGATGCT GGCCAAGCCG
GCCGACGAGC AGCTCACCAC CGAGATCCCG GACAACGTCT ACCAGGGGCT CAAGGCCAAC
CGGGCCAAGG ACGTGCACGT CTTCGCCCGC CGCGGCCCGG CGCACCTGAA GTTCTCGCCG
ATGGAGTTCC GCGAGCTCTC CCACAGCCCG AGCGTGGACG TGGTGATGAC CGAGGAGGGC
TTCGAGATCG ACGACGCCGG GCAGGAGGCC ATCCAGGCCG CCAAGTCCAC CAAGCTCGTC
GTGGACACCC TGCTGAAGTA CCTGGAGAAG GAGCCCACGG GGGCGCCGCA CCGCATCCAC
CTGCACCTCA TGCAGGCGCC GGTGGAGGTG CTGGGTGACG GTTCCGTGAC CGGCCTGCGC
ACCGAGGTGA TGCAGTACAA CGGCGACGGC TCCGTCTCCG GCACCGGCGA GTTCCGCGAC
TGGGACGTGC AGGCCGTGTA CCGCGCCGTG GGCTACCGGA GCACCCCGCT GCAGGGCCTG
CCCTTCGACC ACGGGTCCGG CACGGTCCCG CACGAGGCCG GCCGCGTGCT GGAGGGGGGC
GCCCCCAAGG AGGCTGCCTA CGTCACCGGG TGGATCAAGC GCGGGCCGGT GGGTCTCATC
GGGCACACGA AGTCCGACGC CAAGGAGACC ATCGAGTCCC TGCTGGCGGA CCTCGAGTCC
CTGCCGGCCC CGGTCGGGTC GCCGGACGCG ATGCTGGACC AGCTGCGTGA GCGCGGCGTG
GACTTCACGC TCTTCGACGA GTGGGAGCGC CTGGACGCCC ACGAGATGGC GCTGGGTGCG
GCCAGCGAGC GGGAGCGCAT CAAGGTCGTG AGCCGTGAGG ACATGATCGC CGCCGGGCGC
GAGGCCGCCG AGGAGTTCCG CGCCTCGGCC TGA
 
Protein sequence
MRVAVIGAGP AGIYAADILT KELEQASVDV YDRLPAPYGL VRYGVAPDHP RIKEIVKALR 
RVLAGDQIRF IGNVDFGTDV TFEQLRENYD AVIFATGAMG DRPLDIPGIE KEGSFGAADF
VSWYDGHPDV PREWPLEAES VAVIGAGNVA LDVARMLAKP ADEQLTTEIP DNVYQGLKAN
RAKDVHVFAR RGPAHLKFSP MEFRELSHSP SVDVVMTEEG FEIDDAGQEA IQAAKSTKLV
VDTLLKYLEK EPTGAPHRIH LHLMQAPVEV LGDGSVTGLR TEVMQYNGDG SVSGTGEFRD
WDVQAVYRAV GYRSTPLQGL PFDHGSGTVP HEAGRVLEGG APKEAAYVTG WIKRGPVGLI
GHTKSDAKET IESLLADLES LPAPVGSPDA MLDQLRERGV DFTLFDEWER LDAHEMALGA
ASERERIKVV SREDMIAAGR EAAEEFRASA