| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_01870 |
|---|
| Symbol | |
|---|
| ID | 8371699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 185928 |
|---|
| End bp | 189524 |
|---|
| Gene Length | 3597 bp |
|---|
| Protein Length | 1198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644990494 |
|---|
| Product | cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC |
|---|
| Protein accession | YP_003148040 |
|---|
| Protein GI | 256824080 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit
[TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCGT TCGACCCGCG ACTGCTGCGT CTCCTGCCCG GAACCCGGAA GGAGGTCGCA
GCAGTCGCGT TCCCGGTGGT GCTGCAGGGT GTCGTGGCCG TCCTCCAGGC CCTGGCCGTC
GCGTGGCTGG CCACCGCCGT CACCGCGAGC GTCTACGCCA CCCTGACCGG TCGCCCCACC
CCACCGGCAG GCCTCCCGGA CGACCCCGAC CCCACCCTGG GCCAGCTCGG CCCGTTCGTC
GTCCCCTCCT CCCTGTCCAC CGGGTCCGAT GCGGGGAGCG TCACCTCGTT GCTCGCGCCC
GCCCTCGCGG TGGCGGCGCT GCTGGCCGTG CGCGGCCTGC TCGCAGGGTG GGTGCACCAC
CGCTCGGCCG TAGCAGGCGC CCGGGTGGCC GGCGAGCTGC GTGAGGCTCT GGCTGCGCGC
TGGCTGGCGG GTGGGCGGGG GCGCTCCAGC ACGCAGCTGA CGGCCGGCGT GGGCCAGGTG
GAGCCGTACG TGGCGAACTT CCTGCCCTCG TTGGTGGCCG CCGCCGCGGT GCCGGTGATG
GTCTGGCTGG CCCTGGCCTG GGTGGACCTG TTCAGCGCGG TGGTGGTGCT GCTGACGCTG
CCGCTGCTGC CGGTGTTCGC GGCCCTCATC GGGTCGTCGA CCGCGAACGA GACCGCGCGC
CGCTGGAGGG CCCTGGACGC CCTGGCCGGC CACTTCCTGG ACGTGATGCG GGGGCTGCCC
ACCCTGGTGA ACCTGGGCCG CGCCGAGAAG CAGGTGCGCA CCATCGAGGA GGTCGGCCAG
CGACACCGCC GCGCGACGGT GACCACCCTG CGCACCGCGT TCCTCACCAC CGCGGCCATG
GAGCTTCTCT CGACCATCTC GGTGGCGATC GTCGCGGTGT TCGTGGGCCT GCGGTTGGCG
CACGGCGACA TCGGCCTGAT GGTGGGACTG GCCGCGATCC TGCTGGCCCC GGAGGCGTAC
TGGCCGGTCC GGCGGGTGGG GGCGGACTTC CACGCCGCGG CCGACGGGGT GGAGACGCTC
GATGCGGTGC TGCCGCTGCT CGAGGAGCCG GTCCGGCCCC GTCACCCGGA CGCGCAGGGC
GCGGCGGACG CTCCCGCTCG CGCCACCGGT GACGCCCCGG TCCGCGCCGA GGGGGTGAGC
CTCACCCACG CCGACGGCCC CACCATCGCG CTGGCCCAGG GGTGGTCGCT GCCCGCAGCG
GGCCTGGTCG CGGTCACGGG CCCGTCAGGG GCGGGCAAGT CGACGCTGCT GTGGCTGCTC
GCCGGGCTGG TGGAGCCGAC CCGCGGGCAG GTGGTGGCGC CGCACTCGCA CCTGGTGACG
CAGCGGCCGT ACCTGCCGCG CGGTGGCGTG GAGGCTGCCC TGCGGATCAC CCCGGCCGCC
GCGCGGGCCA CGGACGCGGA GCTGCACGGC GTCGTGGAGC GGGTGGGGCT GCTGCCCACC
ATCGAGCAGC TGCCCCGGGG GTGGGAGACC GACCTGGGCG ACGACGGCCA GGGCCTCTCG
GCCGGCGAAC GCGCCCGGCT GGGTCTGGCC CGGGCGCTGC TGGACGACGC CCCGGTGCTG
CTGCTCGACG AGCCGACCGC CCACCTCGAC GCCGACACCG CCGAGCTCGT GCACCGGGTG
CTGCTCGAGG AGTCCGCGCG GCGGCTGGTG GTCGTGGCCA CGCACCGCGG GGAGCTGGCG
CACCTCGCCG CGTGGCAGGT GGAGGTTGCT GCGGGCCGCG TCGCCCTGCC GGTGCGGGGT
GCCGGCACGG GGACGGCGCA GACCCGGCCC GAACCGGTCG CAGCGCTGGA AGCCACCCTG
CCCGTGGCCA CCGCTCCGGA GGGCGCGGCG CACGGCGGGG GGCGCACCGC ATCGGAGCCG
GTTCCGGAGC GCGCTCCGGA GCAGGTTCCG GGGCGCGACG GCGAGCGCAC GCCGGTCGTC
ACCACCACCC CGAAGCTCTG GCGCGCCGCG CTGGTGGGGG CGCTGTCCTC GCTGGCGGGC
GTGGCGCTCA CCGCGACCTC CGGGTGGCTG ATCGTCCGTG CCTGGGAGCA GCCGGTGGTG
CTGATGCTCA TGGTCGCGAT CGTCGGCGTG CGCACCTTCG GCCTGGCGCG GCCGGTGCTG
CGCTACGCCG AGCGGCTCGA CAGCCACGAC GTGGCGTTGG ACCAGCTGGC CCGACGTCGC
GCCGAGACCT ACCGCCGCCT GGTGCCGCTG ACCCCGGCGC GGCTGGGACG GCGGGGCCGG
GCCCGCGTGC TCACCGGAGT GGTGGCCGAC CTCGACGACG TGGTCATGGC CGCGGTCCGC
TGGTGGGTGC CCCTGGTCGG TGCCCTGCTG ACCGGGCTGG TGGCCGCCGC GCTGCTGGCG
GTGCTGTCGC CCCTCATCGG CCTCCTGGTC GCGCTGCAGA CGCTGCTGGT GGTCGGGGGT
TCGGCGCTGG TGGAGCGGCG CACAGCCGGC GCGCAGCAGC AGGAGCTCGC CGCCCGCGGA
CGCGTGTGGG AGGCGGCCCA CACGGCTGCC GACCGGTGCG ACGAGCTGCG AGCCGTCAAC
GCCGGCGGCA CCGCGCTGCA GACGGTGGTG GCGGCGGACC GGGACGTGGT CCGCTGGGTG
CGCCGCCGCG CCGCGGGGCA GGCCGCCGTG CGTGCCGCCA GCTGGCTGTT GGCCGGTGTG
GTGGTCGCGG TGGCGGCGGT GCTGGCGCCG TCGGCCGGGT GGGGCGGGCC GCTCGTCGCG
CTGCTGGTGC TGACCCCGCT CGCCCTGGCC GACGTGCTGG GGGGCGTGCC CGATGCGGTG
AGCGCCCACT CCCGCGCCCG CGCCGCCACC GAGCGGCTGG AGGCCCTGCT GCGTCAGGAA
CCGGCCGTCG CGCAGGCGGG CGGCCCGACG CAGGCGGGCG GCCCGACGCA GGCGGGCGGC
CCGACGCAGG CGGAGGACAG CGCGCAGGCA GAGGCCGACG CCCCGGTCAG CGCCCACCCG
CACCTGGAGC TGGCCGACCT CACCGCACGC TGGTCGGGGC AGGCCGCCCC CACCGTGGCG
GGGCTCGACC TGGACCTGGC CCCCGGCGAC CGGGTGGCGC TCACCGGGCC GAGCGGCGCC
GGCAAGTCCA CCGTCCTGGC CGTGCTGGCC CGCCACCTGG ACCCGTCCGG CGGCGACTAC
ACCCTGGACG GGGTGGACGT GCTGGACCTG CCGCTGGCCG TCACCCGGGG CACGGTCGCC
TTCCAGGACG ACTCCCCCCA CGTGTTCTCC TCCACCCTCC GGGAGAACCT GCGCACCGCG
CGCCCCACGG CCACCGACGC CGAGCTGGAG GCCGTGCTGG CCGATGCGGG GCTGGGCGAC
TTCCTCGACT CCCTCCCGGA CCGGCTCGAC ACGATGCTGG GGGCCGGCCA CCGGACGGTC
AGCGGGGGCG AGCAGGCCCG CATCGGGCTG GCGCGGACGC TGCTCTCCGA GCGCCCGGTG
GTGCTGCTCG ACGAGCCGGT CGCGCACCTC GACGGCCCCA CGGCACGCGC GGTCATGCAG
CACCTGGGGA CCGCCACGGC GGGCCGGTCG GTGGTGCTGG TCAGCCACCG CACCGAGGGC
CACGAGTGGT GCGACGCCGA GGTGCGGCTC GAGAGCCTGG TCGACGCACG GCGCTGA
|
|---|
| Protein sequence | MKPFDPRLLR LLPGTRKEVA AVAFPVVLQG VVAVLQALAV AWLATAVTAS VYATLTGRPT
PPAGLPDDPD PTLGQLGPFV VPSSLSTGSD AGSVTSLLAP ALAVAALLAV RGLLAGWVHH
RSAVAGARVA GELREALAAR WLAGGRGRSS TQLTAGVGQV EPYVANFLPS LVAAAAVPVM
VWLALAWVDL FSAVVVLLTL PLLPVFAALI GSSTANETAR RWRALDALAG HFLDVMRGLP
TLVNLGRAEK QVRTIEEVGQ RHRRATVTTL RTAFLTTAAM ELLSTISVAI VAVFVGLRLA
HGDIGLMVGL AAILLAPEAY WPVRRVGADF HAAADGVETL DAVLPLLEEP VRPRHPDAQG
AADAPARATG DAPVRAEGVS LTHADGPTIA LAQGWSLPAA GLVAVTGPSG AGKSTLLWLL
AGLVEPTRGQ VVAPHSHLVT QRPYLPRGGV EAALRITPAA ARATDAELHG VVERVGLLPT
IEQLPRGWET DLGDDGQGLS AGERARLGLA RALLDDAPVL LLDEPTAHLD ADTAELVHRV
LLEESARRLV VVATHRGELA HLAAWQVEVA AGRVALPVRG AGTGTAQTRP EPVAALEATL
PVATAPEGAA HGGGRTASEP VPERAPEQVP GRDGERTPVV TTTPKLWRAA LVGALSSLAG
VALTATSGWL IVRAWEQPVV LMLMVAIVGV RTFGLARPVL RYAERLDSHD VALDQLARRR
AETYRRLVPL TPARLGRRGR ARVLTGVVAD LDDVVMAAVR WWVPLVGALL TGLVAAALLA
VLSPLIGLLV ALQTLLVVGG SALVERRTAG AQQQELAARG RVWEAAHTAA DRCDELRAVN
AGGTALQTVV AADRDVVRWV RRRAAGQAAV RAASWLLAGV VVAVAAVLAP SAGWGGPLVA
LLVLTPLALA DVLGGVPDAV SAHSRARAAT ERLEALLRQE PAVAQAGGPT QAGGPTQAGG
PTQAEDSAQA EADAPVSAHP HLELADLTAR WSGQAAPTVA GLDLDLAPGD RVALTGPSGA
GKSTVLAVLA RHLDPSGGDY TLDGVDVLDL PLAVTRGTVA FQDDSPHVFS STLRENLRTA
RPTATDAELE AVLADAGLGD FLDSLPDRLD TMLGAGHRTV SGGEQARIGL ARTLLSERPV
VLLDEPVAHL DGPTARAVMQ HLGTATAGRS VVLVSHRTEG HEWCDAEVRL ESLVDARR
|
|---|
| |