Gene Ksed_01020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_01020 
Symbol 
ID8371615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp104349 
End bp105368 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content77% 
IMG OID644990413 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003147959 
Protein GI256823999 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAA CCAGCGACTC CCTGCCCCCC GCCGCCGACG CGGCGCCCGT GCTCGACCTG 
CGCGGGGTCC ACAAGTCCTT CGGCCGCGGC ACCCGACGGG TTGATGCGGT GCGCGGCGTC
GACCTGACCG TGCACCGCGG CGACGTGGTG GCCCTGCTGG GCCACAACGG CGCCGGCAAG
TCCGTCACCC TCGACATGGC GCTGGGCCTG CAGGCCCCCT CCTCGGGCGA GGTGCGGGTC
TGCGGCGACC CCCCGTCCCG CGCGGTGTCT GCCGGGCGGG TGGGCGCGAT GCTGCAGTCC
GGCGCGCTGC TCGACGACCT GCGCGTGGCC GAGACCGTCC GCGCGGTCGC CAGCCTGCAC
CCCGGCGGCC GCCGCCGCGT GGGCTCGGTG ATGGACCGCG CCGGCCTGAC CCCGTTGGCC
ACCCGGCGCG TCAGCCGCTG CAGCGGGGGC GAGAAGCAGC GGCTGCGCTT CGCCCTGGCG
CTGCTGCCCG ACCCCGACCT GATGGTGCTC GACGAGCCCA CCGCCGGCAT GGACGTCTCC
GCCCGGCAGG AGTTCTGGGA GGTGGTCAGC GCCGAGGCGC AGGCGGGACG CACCATCGTC
TTCGCCACCC ACTACCTCGC GGAGGCCGAG GAGTACGCGC CCCGGACCGT GTTGATGGCC
GGCGGCCGCG TGATCGCCGA CGACACCACC GAGGCCGTCC GCTCGCGGGT CCCCGGCCGG
GTGCTCACCT GCACCACCCC CGATGCGGGA CGCCTCGCCC AGCAGCTGGC GGGCGAGCCC
GACGTGGTCG ACGTCCGCAC CCCCACCCCC GACCGGCTGG AGATGCGGGT GACGGACTCC
GACCGCTTCG CCCGGCTGGC CCTCACCGAG TGGCGGGCCA CGGGCCTGCA GATCGTGCCG
CTGGGCCTGG ACGAGGCCTT CGCCGAGCTC ACCCGGGAGG CGACCGACCC GCACGGCGGC
ACCGACCCGG ACCAGCCCAC CTCGCCCGCC CGCCCCGAGC CCGCGGCCAC CGCCGCCTGA
 
Protein sequence
MERTSDSLPP AADAAPVLDL RGVHKSFGRG TRRVDAVRGV DLTVHRGDVV ALLGHNGAGK 
SVTLDMALGL QAPSSGEVRV CGDPPSRAVS AGRVGAMLQS GALLDDLRVA ETVRAVASLH
PGGRRRVGSV MDRAGLTPLA TRRVSRCSGG EKQRLRFALA LLPDPDLMVL DEPTAGMDVS
ARQEFWEVVS AEAQAGRTIV FATHYLAEAE EYAPRTVLMA GGRVIADDTT EAVRSRVPGR
VLTCTTPDAG RLAQQLAGEP DVVDVRTPTP DRLEMRVTDS DRFARLALTE WRATGLQIVP
LGLDEAFAEL TREATDPHGG TDPDQPTSPA RPEPAATAA