| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_00570 |
|---|
| Symbol | |
|---|
| ID | 8371570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 60008 |
|---|
| End bp | 61147 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644990373 |
|---|
| Product | carbohydrate ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_003147919 |
|---|
| Protein GI | 256823959 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG TCACCTACGA CGCCGTCAGT TGCGTCTACC CCGGCCAGAC CCGCCCGGCC
GTCGACAAGC TCGACCTCGA GATCGCCGAC GGCGAGTTCC TGGTGCTGGT CGGCCCCTCC
GGCTGCGGCA AGTCCACCAC CCTGCGCATG CTCGCGGGGC TGGAGCAGGT CAGCGAAGGC
AGCATCCGCA TCGGCGAGAC CGACGTCACC GGCGTGGCCC CCCGCGACCG CGACATCGCG
ATGGTCTTCC AGAACTACGC CCTGTACCCG CACATGTCGG TGCGCGACAA CATGGGCTTC
GCGCTGAAGA TCGCCGGCGT CCCCACCGCC GAGCGCAACC AGCGGGTGGA GGAGGCCGCC
GAGCTGCTGG ATCTCACCCC CTACCTGGAC CGCAAGCCGA AGGCCCTCTC CGGTGGGCAG
CGCCAGCGCG TGGCGATGGG GCGCGCGATC GTGCGCTCCC CCAAGGTCTT CCTCATGGAC
GAGCCGCTGT CCAACCTGGA CGCCAAGCTG CGCGTGCAGA CCCGCACCCA GATCGCCTCG
CTCACCCGCG AGCTCGGGGT CACCACCGTC TACGTGACGC ACGACCAGGT GGAGGCCATG
ACCATGGGTG ACCGCGTGGC GGTGCTCAAG GACGGGCTGC TGATGCAGGT GGACACCCCC
CGCGCCCTGT ACGACCGTCC CCGCAACGTG TTCGTGGCGG GCTTCATCGG CTCCCCGAGC
ATGAACCTGG TGCACGCCCC GGTCGAGGGT GGCGCGGTGC GCTTCGGTGC GTCGACCTTC
CAGCTCACCT CCGAGCAGCA GGCCGCCCTG ACCGGCTCCG GCGTCGTCGT CGGCATCCGC
CCCGAGGACA TGACGCTCGG CCAGCAGGGC GAGGGCGCGC AGGTGCGCAT CAACCTCGTC
GAGGAGCTGG GTGCCGACGC CTACGTCTAC GGCCGGCTGG CCGACGAGAG CGGCACCCTG
GAGACCGTCG TGACCGAGAA GGCGGACGAC GACGAGGACG CCTCGAGCGA CACCATCGTC
ATGCGCGCCG ACGGCCGCAC CCCGCCGCGT GCCGGCGAGA CGGTGTGGAT GGTGCCGAAG
GTGGAGCACG TCCACCTCTT CGACGCGGCG ACCGGCGACC GTCTGCCCGA CGCCGGCTGA
|
|---|
| Protein sequence | MATVTYDAVS CVYPGQTRPA VDKLDLEIAD GEFLVLVGPS GCGKSTTLRM LAGLEQVSEG
SIRIGETDVT GVAPRDRDIA MVFQNYALYP HMSVRDNMGF ALKIAGVPTA ERNQRVEEAA
ELLDLTPYLD RKPKALSGGQ RQRVAMGRAI VRSPKVFLMD EPLSNLDAKL RVQTRTQIAS
LTRELGVTTV YVTHDQVEAM TMGDRVAVLK DGLLMQVDTP RALYDRPRNV FVAGFIGSPS
MNLVHAPVEG GAVRFGASTF QLTSEQQAAL TGSGVVVGIR PEDMTLGQQG EGAQVRINLV
EELGADAYVY GRLADESGTL ETVVTEKADD DEDASSDTIV MRADGRTPPR AGETVWMVPK
VEHVHLFDAA TGDRLPDAG
|
|---|
| |